RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 R3HCC1LQ7Z5L2 792 aaKnown RBP11.05□□□□□ -0.64
SS18-219ENST00000581570 LCA5Q86VQ0 697 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 OR56A1Q8NGH5 318 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 ZNF563Q8TA94 476 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 TMEM186Q96B77 213 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 MTERF3Q96E29 417 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 BOD1Q96IK1 185 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 FCRL1Q96LA6 429 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 OR7D2Q96RA2 312 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 JMJD8Q96S16 334 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 DOK1Q99704 481 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 NAA11Q9BSU3 229 aaPredicted RBP11.05□□□□□ -0.64
SS18-219ENST00000581570 CCDC106Q9BWC9 280 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 OR11A1Q9GZK7 315 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 NMUR2Q9GZQ4 415 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 KCNF1Q9H3M0 494 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 ZNF696Q9H7X3 374 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 TNFRSF12AQ9NP84 129 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 GPATCH2Q9NW75 528 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 TMEM181Q9P2C4 612 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 TRAPPC4Q9Y296 219 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 GRIP1Q9Y3R0 1128 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 SPEF1Q9Y4P9 236 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 PTGDR2Q9Y5Y4 395 aa11.05□□□□□ -0.64
SS18-219ENST00000581570 SH3PXD2BA1X283 911 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 LYNX1G3V0Z9 82 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 TMPRSS2O15393 492 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 EIF1BO60739 113 aaKnown RBP11.04□□□□□ -0.64
SS18-219ENST00000581570 LYNX1P0DP58 116 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 CCNA2P20248 432 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 PAX7P23759 505 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 ASMTP46597 345 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 LIMS1P48059 325 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 KHKP50053 298 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 ARFIP2P53365 341 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 NAA20P61599 178 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 SLC17A1Q14916 467 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 ZNF141Q15928 474 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 ADRM1Q16186 407 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 TBRG1Q3YBR2 411 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 RFTN2Q52LD8 501 aaPredicted RBP11.04□□□□□ -0.64
SS18-219ENST00000581570 EIF3MQ7L2H7 374 aaKnown RBP11.04□□□□□ -0.64
SS18-219ENST00000581570 SPATA21Q7Z572 469 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 SVOPLQ8N434 492 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 POMGNT2Q8NAT1 580 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 OR4F15Q8NGB8 312 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 OR5P2Q8WZ92 322 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 CCDC126Q96EE4 140 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 LPAR2Q9HBW0 351 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 DYNLRB1Q9NP97 96 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 TMEM45AQ9NWC5 275 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 ATP6V1HQ9UI12 483 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 KCNE5Q9UJ90 142 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 MGAM2Q2M2H8 2515 aa11.04□□□□□ -0.64
SS18-219ENST00000581570 CENPVL1A0A0U1RR11 272 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 STX11O75558 287 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 SKAP2O75563 359 aaPredicted RBP11.03□□□□□ -0.64
SS18-219ENST00000581570 URI1O94763 535 aaPredicted RBP11.03□□□□□ -0.64
SS18-219ENST00000581570 CECR9P0C854 216 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 NPR2P20594 1047 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 CALCRP30988 508 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 RYKP34925 604 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 THBS4P35443 961 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 UBE2NP61088 152 aaKnown RBP11.03□□□□□ -0.64
SS18-219ENST00000581570 RPL38P63173 70 aaKnown RBP11.03□□□□□ -0.64
SS18-219ENST00000581570 SLC35A1P78382 337 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 IL1RL1Q01638 556 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 CFAP157Q5JU67 520 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 CLEC6AQ6EIG7 209 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 FRMD7Q6ZUT3 714 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 AAED1Q7RTV5 226 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 GRINAQ7Z429 371 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 ABHD12BQ7Z5M8 362 aaPredicted RBP11.03□□□□□ -0.64
SS18-219ENST00000581570 ADGRG3Q86Y34 549 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 NUP37Q8NFH4 326 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 OR7A2PQ8NGA2 310 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 OR5D16Q8NGK9 328 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 OR2T11Q8NH01 316 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 TMEM45BQ96B21 275 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 AURKBQ96GD4 344 aaPredicted RBP11.03□□□□□ -0.64
SS18-219ENST00000581570 LRRC37BQ96QE4 947 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 ZNF442Q9H7R0 627 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 MKLN1Q9UL63 735 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 USP22Q9UPT9 525 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 PCDHGB1Q9Y5G3 927 aa11.03□□□□□ -0.64
SS18-219ENST00000581570 A0A087WUV0 522 aaPredicted RBP11.02□□□□□ -0.65
SS18-219ENST00000581570 TMEM129A0AVI4 362 aa11.02□□□□□ -0.65
SS18-219ENST00000581570 G3V2L1 256 aa11.02□□□□□ -0.65
SS18-219ENST00000581570 SCAMP2O15127 329 aaKnown RBP11.02□□□□□ -0.65
SS18-219ENST00000581570 FCMRO60667 390 aa11.02□□□□□ -0.65
SS18-219ENST00000581570 UGT2B17O75795 530 aa11.02□□□□□ -0.65
SS18-219ENST00000581570 KRT33AO76009 404 aa11.02□□□□□ -0.65
SS18-219ENST00000581570 C6orf47O95873 294 aa11.02□□□□□ -0.65
SS18-219ENST00000581570 LGI1O95970 557 aa11.02□□□□□ -0.65
SS18-219ENST00000581570 MSMBP08118 114 aa11.02□□□□□ -0.65
SS18-219ENST00000581570 IGFBP1P08833 259 aaPredicted RBP11.02□□□□□ -0.65
SS18-219ENST00000581570 ADRA2AP08913 450 aa11.02□□□□□ -0.65
SS18-219ENST00000581570 MYL2P10916 166 aa11.02□□□□□ -0.65
SS18-219ENST00000581570 LAMP1P11279 417 aa11.02□□□□□ -0.65
SS18-219ENST00000581570 IMPDH2P12268 514 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms