RNA–Protein interactions for RNA: ENST00000580584.1

PMP22-208, Transcript of peripheral myelin protein 22, human

TSL 3

Gene PMP22, Length 428 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PMP22-208	ENST00000580584	ZNF208	O43345	1280 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	EDF1	O60869	148 aa	Known RBP	13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	LYZL6	O75951	148 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	PGM3	O95394	542 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	IGHV3-9	P01782	118 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	NCF2	P19878	526 aa	Predicted RBP	13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	FKBP2	P26885	142 aa	Known RBP	13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	CLK1	P49759	484 aa	Known RBP	13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	HOXC5	Q00444	222 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	BNIP2	Q12982	314 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	ZNF311	Q5JNZ3	666 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	GCNT6	Q5T4J0	391 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584		Q6ZT83	130 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	GALNT5	Q7Z7M9	940 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	TGIF2LY	Q8IUE0	185 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	ZNF100	Q8IYN0	542 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	BBS10	Q8TAM1	723 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	PIGX	Q8TBF5	258 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	PLPPR2	Q96GM1	343 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	SPATA9	Q9BWV2	254 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	ADAM19	Q9H013	955 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	EMC3	Q9P0I2	261 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	VPS13C	Q709C8	3753 aa		13.74	□□□□□ -0.21
PMP22-208	ENST00000580584	HEATR5A	Q86XA9	2040 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	C5orf58	C9J3I9	102 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	DNPH1	O43598	174 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	PLAU	P00749	431 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	FPR1	P21462	350 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	ADSL	P30566	484 aa	Predicted RBP	13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	NTF4	P34130	210 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	FOXD4	Q12950	439 aa	Predicted RBP	13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	ITGAD	Q13349	1161 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	P2RY6	Q15077	328 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	TAB1	Q15750	504 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	STK11	Q15831	433 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	ACKR1	Q16570	336 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	WBP2NL	Q6ICG8	309 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	ZNF704	Q6ZNC4	412 aa	Predicted RBP	13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	ATG4D	Q86TL0	474 aa	Predicted RBP	13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	HDHD5	Q9BXW7	423 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	RSPO3	Q9BXY4	272 aa	Predicted RBP	13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	ZNF385D	Q9H6B1	395 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	BCL2L10	Q9HD36	194 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	BEX4	Q9NWD9	120 aa	Predicted RBP	13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	ZNF232	Q9UNY5	417 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	TRAPPC4	Q9Y296	219 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	NOSIP	Q9Y314	301 aa	Known RBP	13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	IFT52	Q9Y366	437 aa		13.73	□□□□□ -0.21
PMP22-208	ENST00000580584	NF1	P21359	2839 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584		A0A0G2JND7	137 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584		A0A1W2PP18	115 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	ARAF	P10398	606 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	CD99	P14209	185 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	IGHV1-2	P23083	117 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	CXCR1	P25024	350 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	IDUA	P35475	653 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	NR1H2	P55055	460 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	COPZ1	P61923	177 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	ADAM8	P78325	824 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	SLC35A1	P78382	337 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	H3F3A	P84243	136 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	CEACAM7	Q14002	265 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	CAPRIN1	Q14444	709 aa	Known RBP	13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	PDK3	Q15120	406 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	PRAMEF8	Q5VWM4	474 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	PRAMEF7	Q5VXH5	474 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	DLEU7	Q6UYE1	221 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	COMTD1	Q86VU5	262 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	UBE2J2	Q8N2K1	259 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	WFDC11	Q8NEX6	87 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	STON2	Q8WXE9	905 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	APH1A	Q96BI3	265 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	CCL19	Q99731	98 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	CPPED1	Q9BRF8	314 aa	Predicted RBP	13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	TMUB1	Q9BVT8	246 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	POTEKP	Q9BYX7	375 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	ARMC7	Q9H6L4	198 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	TMEM45A	Q9NWC5	275 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	ZNF446	Q9NWS9	450 aa		13.72	□□□□□ -0.21
PMP22-208	ENST00000580584	MPDZ	O75970	2070 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	LIPT2	A6NK58	231 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	AKR7A3	O95154	331 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	COX5A	P20674	150 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	PPIB	P23284	216 aa	Known RBP	13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	AQP1	P29972	269 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	SLC16A1	P53985	500 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	IRX1	P78414	480 aa	Predicted RBP	13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	CDK6	Q00534	326 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	OR7A5	Q15622	319 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	ZSWIM7	Q19AV6	140 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	SEZ6L2	Q6UXD5	910 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	CASP12	Q6UXS9	341 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	DHDDS	Q86SQ9	333 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	RETREG3	Q86VR2	466 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	KRTAP1-3	Q8IUG1	177 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	HSD17B8	Q92506	261 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	C3orf49	Q96BT1	292 aa		13.71	□□□□□ -0.21
PMP22-208	ENST00000580584	RABEP2	Q9H5N1	569 aa		13.71	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms