RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 ADAM11O75078 769 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 SLC22A3O75751 556 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 CYP7B1O75881 506 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 LY6G6DO95868 133 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 CHRM4P08173 479 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 IL7RP16871 459 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 IGHV1-2P23083 117 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 PTAFRP25105 342 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 IL12AP29459 219 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 MVDP53602 400 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 ATP5J2P56134 94 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 CAPRIN1Q14444 709 aaKnown RBP12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 DNM1P46Q6ZS02 220 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 SMAP2Q8WU79 429 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 TMEM45BQ96B21 275 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 APH1AQ96BI3 265 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 ARL5BQ96KC2 179 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 ZNF300Q96RE9 604 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 NAA11Q9BSU3 229 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 RMND5AQ9H871 391 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 BARX1Q9HBU1 254 aaPredicted RBP12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 ASB6Q9NWX5 421 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 P2RX2Q9UBL9 471 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 OSGIN1Q9UJX0 560 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 SLC9A8Q9Y2E8 581 aa12.8□□□□□ -0.36
SMARCE1-216ENST00000580419 COL6A5A8TX70 2615 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 TMED7-TICAM2A0A0A6YYA0 188 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 IGHV3-15A0A0B4J1V0 119 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 DPRXA6NFQ7 191 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 FZD7O75084 574 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 BCAS1O75363 584 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 MRPL33O75394 65 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 VAMP5O95183 116 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 BMP2P12643 396 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 EPHA3P29320 983 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 IDUAP35475 653 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 IDH2P48735 452 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 CRISP3P54108 245 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 TGFBR3Q03167 851 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 BSPH1Q075Z2 132 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 EPS8Q12929 822 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 SLC17A1Q14916 467 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 SYPL1Q16563 259 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 TMEM108Q6UXF1 575 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 ZNF621Q6ZSS3 439 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 CIARTQ8N365 385 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 ANKFN1Q8N957 763 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 WDR60Q8WVS4 1066 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 CNOT9Q92600 299 aaKnown RBP12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 TLCD1Q96CP7 247 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 ZNF317Q96PQ6 595 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 SMR3AQ99954 134 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 CENPHQ9H3R5 247 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 ARMC7Q9H6L4 198 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 PRSS50Q9UI38 385 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 LAMP3Q9UQV4 416 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 TMED7Q9Y3B3 224 aa12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 MAGED1Q9Y5V3 778 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 V9GYY5 206 aaPredicted RBP12.79□□□□□ -0.36
SMARCE1-216ENST00000580419 A0A0G2JPF8 293 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 OR6C65A6NJZ3 312 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 HNRNPCL2B2RXH8 293 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 SHISA9B4DS77 424 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 HNRNPCL3B7ZW38 293 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 HNRNPCL1O60812 293 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 LYZL6O75951 148 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 TGDSO95455 350 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 TFPTP0C1Z6 253 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 HNRNPCL4P0DMR1 293 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 NR2F1P10589 423 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 TFPIP10646 304 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 RNF144AP50876 292 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 NRF1Q16656 503 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 PGGHGQ32M88 737 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 LIN52Q52LA3 116 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 MRPL2Q5T653 305 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 KLHL17Q6TDP4 642 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 ITCHQ96J02 903 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 INPP5KQ9BT40 448 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 TRAF4Q9BUZ4 470 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 RAD21L1Q9H4I0 556 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 WDR55Q9H6Y2 383 aaPredicted RBP12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 MANSC1Q9H8J5 431 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 MOV10Q9HCE1 1003 aaKnown RBP12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 BCL2L10Q9HD36 194 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 OBP2BQ9NPH6 170 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 NKIRAS1Q9NYS0 192 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 IFT52Q9Y366 437 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 FLVCR1Q9Y5Y0 555 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 SLC25A15Q9Y619 301 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 ARFGEF3Q5TH69 2177 aa12.78□□□□□ -0.36
SMARCE1-216ENST00000580419 A0A1W2PP18 115 aa12.77□□□□□ -0.37
SMARCE1-216ENST00000580419 FAM234BA2RU67 622 aa12.77□□□□□ -0.37
SMARCE1-216ENST00000580419 ERLIN1O75477 346 aa12.77□□□□□ -0.37
SMARCE1-216ENST00000580419 GPIP06744 558 aa12.77□□□□□ -0.37
SMARCE1-216ENST00000580419 SOD3P08294 240 aa12.77□□□□□ -0.37
SMARCE1-216ENST00000580419 TACR3P29371 465 aa12.77□□□□□ -0.37
SMARCE1-216ENST00000580419 RYKP34925 604 aa12.77□□□□□ -0.37
SMARCE1-216ENST00000580419 ACAA2P42765 397 aaKnown RBP12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms