RNA–Protein interactions for RNA: ENST00000580315.1

CDC42EP4-205, Transcript of CDC42 effector protein 4, humanhuman

TSL 2

Gene CDC42EP4, Length 1,022 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-205ENST00000580315 DDIT4LQ96D03 193 aa22.14■■□□□ 1.13
CDC42EP4-205ENST00000580315 CGREF1Q99674 301 aa22.14■■□□□ 1.13
CDC42EP4-205ENST00000580315 CPPED1Q9BRF8 314 aaPredicted RBP22.14■■□□□ 1.13
CDC42EP4-205ENST00000580315 OSGIN1Q9UJX0 560 aa22.14■■□□□ 1.13
CDC42EP4-205ENST00000580315 IGHV3-15A0A0B4J1V0 119 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 C16orf97H3BN30 126 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 ZNF208O43345 1280 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 YES1P07947 543 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 SLC6A2P23975 617 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 HOXC12P31275 282 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 UGT2B10P36537 528 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 SF3A3Q12874 501 aaKnown RBP eCLIP22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 SCARB2Q14108 478 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 WBP2NLQ6ICG8 309 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 CGB2Q6NT52 195 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 BEND4Q6ZU67 534 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 BIVMQ86UB2 503 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 RETREG3Q86VR2 466 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 TUSC5Q8IXB3 177 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 CLIP4Q8N3C7 705 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 SLC35B4Q969S0 331 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 ANKRD27Q96NW4 1050 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 IKZF5Q9H5V7 419 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 C12orf49Q9H741 205 aa22.13■■□□□ 1.13
CDC42EP4-205ENST00000580315 NSD1Q96L73 2696 aaPredicted RBP22.12■■□□□ 1.13
CDC42EP4-205ENST00000580315 SMAD9O15198 467 aaKnown RBP22.12■■□□□ 1.13
CDC42EP4-205ENST00000580315 PMS2P2O95744 297 aa22.12■■□□□ 1.13
CDC42EP4-205ENST00000580315 FESP07332 822 aa22.12■■□□□ 1.13
CDC42EP4-205ENST00000580315 CXCR1P25024 350 aa22.12■■□□□ 1.13
CDC42EP4-205ENST00000580315 ACAA2P42765 397 aaKnown RBP22.12■■□□□ 1.13
CDC42EP4-205ENST00000580315 RASGEF1BQ0VAM2 473 aa22.12■■□□□ 1.13
CDC42EP4-205ENST00000580315 C10orf111Q8N326 155 aa22.12■■□□□ 1.13
CDC42EP4-205ENST00000580315 CADM2Q8N3J6 435 aa22.12■■□□□ 1.13
CDC42EP4-205ENST00000580315 ZNF607Q96SK3 696 aa22.12■■□□□ 1.13
CDC42EP4-205ENST00000580315 SMR3AQ99954 134 aa22.12■■□□□ 1.13
CDC42EP4-205ENST00000580315 OR11A1Q9GZK7 315 aa22.12■■□□□ 1.13
CDC42EP4-205ENST00000580315 ADAM19Q9H013 955 aa22.12■■□□□ 1.13
CDC42EP4-205ENST00000580315 KLHL14Q9P2G3 628 aa22.12■■□□□ 1.13
CDC42EP4-205ENST00000580315 DNPH1O43598 174 aa22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 CYTIPO60759 359 aa22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 PRKAR1BP31321 381 aa22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 LTBQ06643 244 aa22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 MAPRE2Q15555 327 aa22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 CYP51A1Q16850 503 aa22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 MTDHQ86UE4 582 aaKnown RBP22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 HIPK4Q8NE63 616 aa22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 ARL5BQ96KC2 179 aa22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 MED18Q9BUE0 208 aa22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 KLHL4Q9C0H6 718 aa22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 BCO1Q9HAY6 547 aa22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 ANGPT4Q9Y264 503 aa22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 TRAPPC4Q9Y296 219 aa22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 TESMINQ9Y4I5 508 aa22.11■■□□□ 1.13
CDC42EP4-205ENST00000580315 TMEM72A0PK05 275 aa22.1■■□□□ 1.13
CDC42EP4-205ENST00000580315 PRORSD1PA6NEY8 169 aa22.1■■□□□ 1.13
CDC42EP4-205ENST00000580315 SERPINB7O75635 380 aa22.1■■□□□ 1.13
CDC42EP4-205ENST00000580315 HRGP04196 525 aa22.1■■□□□ 1.13
CDC42EP4-205ENST00000580315 RBBP4Q09028 425 aa22.1■■□□□ 1.13
CDC42EP4-205ENST00000580315 SERPINA11Q86U17 422 aa22.1■■□□□ 1.13
CDC42EP4-205ENST00000580315 C11orf65Q8NCR3 313 aa22.1■■□□□ 1.13
CDC42EP4-205ENST00000580315 C18orf12Q96KH6 178 aa22.1■■□□□ 1.13
CDC42EP4-205ENST00000580315 PSD2Q9BQI7 771 aa22.1■■□□□ 1.13
CDC42EP4-205ENST00000580315 SAR1AQ9NR31 198 aa22.1■■□□□ 1.13
CDC42EP4-205ENST00000580315 ZNF226Q9NYT6 803 aa22.1■■□□□ 1.13
CDC42EP4-205ENST00000580315 TMEM181Q9P2C4 612 aa22.1■■□□□ 1.13
CDC42EP4-205ENST00000580315 CHST2Q9Y4C5 530 aa22.1■■□□□ 1.13
CDC42EP4-205ENST00000580315 HEATR5AQ86XA9 2040 aa22.09■■□□□ 1.13
CDC42EP4-205ENST00000580315 PRG2P13727 222 aa22.09■■□□□ 1.13
CDC42EP4-205ENST00000580315 OR2B6P58173 313 aa22.09■■□□□ 1.13
CDC42EP4-205ENST00000580315 MTPNP58546 118 aa22.09■■□□□ 1.13
CDC42EP4-205ENST00000580315 KLF10Q13118 480 aa22.09■■□□□ 1.13
CDC42EP4-205ENST00000580315 CYLC2Q14093 348 aaPredicted RBP22.09■■□□□ 1.13
CDC42EP4-205ENST00000580315 ADRM1Q16186 407 aa22.09■■□□□ 1.13
CDC42EP4-205ENST00000580315 MMEL1Q495T6 779 aa22.09■■□□□ 1.13
CDC42EP4-205ENST00000580315 DHRS4L2Q6PKH6 230 aa22.09■■□□□ 1.13
CDC42EP4-205ENST00000580315 Q71RC1 249 aaPredicted RBP22.09■■□□□ 1.13
CDC42EP4-205ENST00000580315 NUFIP2Q7Z417 695 aaKnown RBP22.09■■□□□ 1.13
CDC42EP4-205ENST00000580315 BHLHE22Q8NFJ8 381 aaPredicted RBP22.09■■□□□ 1.13
CDC42EP4-205ENST00000580315 KLHL28Q9NXS3 571 aa22.09■■□□□ 1.13
CDC42EP4-205ENST00000580315 EMC3Q9P0I2 261 aa22.09■■□□□ 1.13
CDC42EP4-205ENST00000580315 A0A1W2PPR1 153 aa22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 ZNF724A8MTY0 619 aa22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 BBIP1A8MTZ0 92 aa22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 EIF1BO60739 113 aaKnown RBP22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 CD53P19397 219 aa22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 ADSLP30566 484 aaPredicted RBP22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 SLC35A1P78382 337 aa22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 PDK3Q15120 406 aa22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 POU4F3Q15319 338 aa22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 TRMT5Q32P41 509 aaKnown RBP22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 COQ5Q5HYK3 327 aa22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 KRTAP1-3Q8IUG1 177 aa22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 PIGXQ8TBF5 258 aa22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 WFIKKN1Q96NZ8 548 aa22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 SH3GL1Q99961 368 aa22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 RPS6KB2Q9UBS0 482 aa22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 SLC13A4Q9UKG4 626 aa22.08■■□□□ 1.13
CDC42EP4-205ENST00000580315 FBP2O00757 339 aa22.07■■□□□ 1.12
CDC42EP4-205ENST00000580315 INHBBP09529 407 aa22.07■■□□□ 1.12
CDC42EP4-205ENST00000580315 PPP3CBP16298 524 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms