RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 BBIP1A8MTZ0 92 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 A8MVM7 634 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 M0QX08 132 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 ETV2O00321 342 aaPredicted RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 FAAHO00519 579 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 GPR171O14626 319 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 MRASO14807 208 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 AIM2O14862 343 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 SMAD9O15198 467 aaKnown RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 ZNF208O43345 1280 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 FRS3O43559 492 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 MRPL33O75394 65 aaKnown RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 CTAG2O75638 210 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 KRT33AO76009 404 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 PMS2P2O95744 297 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 ADAP00813 363 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 CGAP01215 116 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 IFNA14P01570 189 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 ARAFP10398 606 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 PNMTP11086 282 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 BMP2P12643 396 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 RPS4Y1P22090 263 aaKnown RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 IL32P24001 234 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 AGTR1P30556 359 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 ADSLP30566 484 aaPredicted RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 PRKAR1BP31321 381 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 IDUAP35475 653 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 ACAA2P42765 397 aaKnown RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 SEC24CP53992 1094 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 RGS8P57771 180 aaPredicted RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 KRTAP10-9P60411 292 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 IL1RL1Q01638 556 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 BNIP2Q12982 314 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 CEACAM7Q14002 265 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 POU4F3Q15319 338 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 OR7A5Q15622 319 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 ADRM1Q16186 407 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 TRMT5Q32P41 509 aaKnown RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 RNF220Q5VTB9 566 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 NANOGP8Q6NSW7 305 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 NUFIP2Q7Z417 695 aaKnown RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 SPATA21Q7Z572 469 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 PATL1Q86TB9 770 aaKnown RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 GPAT4Q86UL3 456 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 CDH24Q86UP0 819 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 RETREG3Q86VR2 466 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 RANBP3LQ86VV4 465 aaPredicted RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 CCDC103Q8IW40 242 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 SLC30A8Q8IWU4 369 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 SMYD1Q8NB12 490 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 ACBD4Q8NC06 268 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 STEAP2Q8NFT2 490 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 RNF128Q8TEB7 428 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 DNAJA4Q8WW22 397 aaPredicted RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 APH1AQ96BI3 265 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 LRRC58Q96CX6 371 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 CPPED1Q9BRF8 314 aaPredicted RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 TRIM2Q9C040 744 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 ADAM19Q9H013 955 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 IKZF5Q9H5V7 419 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 ZNF385DQ9H6B1 395 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 CCDC134Q9H6E4 229 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 COQ10BQ9H8M1 238 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 NANOGQ9H9S0 305 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 RASSF1Q9NS23 344 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 PARPBPQ9NWS1 579 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 ARMCX1Q9P291 453 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 NOSIPQ9Y314 301 aaKnown RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 ANKRD17O75179 2603 aaKnown RBP5.84□□□□□ -1.47
TRAF4-213ENST00000578917 FREM3P0C091 2139 aa5.84□□□□□ -1.47
TRAF4-213ENST00000578917 OTOGQ6ZRI0 2925 aa5.84□□□□□ -1.48
TRAF4-213ENST00000578917 CACNA1CQ13936 2221 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 TRBV5-3A0A0A0MS03 114 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 CIB4A0PJX0 185 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 GMNCA6NCL1 334 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 ZNF724A8MTY0 619 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 FBP2O00757 339 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 GSTA4O15217 222 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 SLC22A2O15244 555 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 DNPH1O43598 174 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 TPST1O60507 370 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 CYTIPO60759 359 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 ADAM11O75078 769 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 AKR7A3O95154 331 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 AHSA1O95433 338 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 PPP3CBP16298 524 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 DNASE1P24855 282 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 RPS5P46782 204 aaKnown RBP5.83□□□□□ -1.48
TRAF4-213ENST00000578917 FOXD4Q12950 439 aaPredicted RBP5.83□□□□□ -1.48
TRAF4-213ENST00000578917 C1DQ13901 141 aaKnown RBP5.83□□□□□ -1.48
TRAF4-213ENST00000578917 KEAP1Q14145 624 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 SELPLGQ14242 412 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 P2RY6Q15077 328 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 STK11Q15831 433 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 RABL3Q5HYI8 236 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 COQ5Q5HYK3 327 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 ALG10BQ5I7T1 473 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 OTUD3Q5T2D3 398 aaPredicted RBP5.83□□□□□ -1.48
TRAF4-213ENST00000578917 C1orf140Q5VVS0 124 aa5.83□□□□□ -1.48
TRAF4-213ENST00000578917 CGB2Q6NT52 195 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms