RNA–Protein interactions for RNA: ENST00000578663.1

CDK5RAP3-209, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 949 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-209ENST00000578663 MTERF3Q96E29 417 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZNF764Q96H86 408 aaPredicted RBP6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SORCS2Q96PQ0 1159 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 BBS4Q96RK4 519 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TBL1XR1Q9BZK7 514 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 RTN4RQ9BZR6 473 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 NMUR2Q9GZQ4 415 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 GLIPR2Q9H4G4 154 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 METTL17Q9H7H0 456 aaPredicted RBP6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FKRPQ9H9S5 495 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SAR1AQ9NR31 198 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 GIMAP4Q9NUV9 329 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TAS2R7Q9NYW3 318 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 KLHL9Q9P2J3 617 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FBXO9Q9UK97 447 aaPredicted RBP6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 MRTO4Q9UKD2 239 aaKnown RBP6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 VDAC3Q9Y277 283 aa6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 NUP214P35658 2090 aaPredicted RBP6.29□□□□□ -1.4
CDK5RAP3-209ENST00000578663 A0A1W2PRB8 838 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TTC36A6NLP5 189 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 GJE1A6NN92 205 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SHISA8B8ZZ34 492 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ALG1L2C9J202 215 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 NR5A2O00482 541 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SCN2BO60939 215 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SLC22A3O75751 556 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PDE5AO76074 875 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 IL33O95760 270 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ANGPTL1O95841 491 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 C6orf47O95873 294 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FAM107AO95990 144 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 NGFRP08138 427 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 IGHV1-2P23083 117 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 APEX1P27695 318 aaKnown RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 NTSP30990 170 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 S100A3P33764 101 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 RPL3P39023 403 aaKnown RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 EIF1P41567 113 aaKnown RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FRKP42685 505 aaPredicted RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 KHKP50053 298 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZNF41P51814 821 aaPredicted RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 NCBP2P52298 156 aaKnown RBP eCLIP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 POLR2JP52435 117 aaKnown RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CLNS1AP54105 237 aaKnown RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 MANFP55145 182 aaKnown RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SNRPD2P62316 118 aaKnown RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SPOCK1Q08629 439 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZNF155Q12901 538 aaPredicted RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 HSPB3Q12988 150 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TIGD2Q4W5G0 525 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 AGKQ53H12 422 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 VAX1Q5SQQ9 334 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CPTPQ5TA50 214 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 METTL21CQ5VZV1 264 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 RINLQ6ZS11 566 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZNF551Q7Z340 670 aaPredicted RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 MTERF4Q7Z6M4 381 aaKnown RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PEG10Q86TG7 708 aaKnown RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 MARCH3Q86UD3 253 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ANKRD46Q86W74 232 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CLECL1Q8IZS7 167 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FAM9CQ8IZT9 166 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZNF433Q8N7K0 673 aaPredicted RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 OR4N2Q8NGD1 307 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 RBMXL1Q96E39 390 aaKnown RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 RNF145Q96MT1 663 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 AMDHD1Q96NU7 426 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ZBTB18Q99592 522 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 DUSP26Q9BV47 211 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ANKRA2Q9H9E1 313 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 Q9N2J8 555 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SLC52A3Q9NQ40 469 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SIRT3Q9NTG7 399 aaPredicted RBP6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 MED17Q9NVC6 651 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 FLRT3Q9NZU0 649 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 CCDC167Q9P0B6 97 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 PCDHB10Q9UN67 800 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 TRIM33Q9UPN9 1127 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 ARL2BPQ9Y2Y0 163 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SPEF1Q9Y4P9 236 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 SLC25A15Q9Y619 301 aa6.28□□□□□ -1.4
CDK5RAP3-209ENST00000578663 LYSTQ99698 3801 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 A0A087WV62 115 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 LRP5LA4QPB2 252 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 ZNF724A8MTY0 619 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 B4DSR2 109 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 LILRA1O75019 489 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 NME6O75414 186 aaPredicted RBP6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 UTS2O95399 124 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 PSMG1O95456 288 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 STAMBPO95630 424 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 NTN1O95631 604 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 CPSF4O95639 269 aaKnown RBP6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 IFI6P09912 130 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 CDKN2CP42773 168 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 PPOXP50336 477 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 ZNF83P51522 516 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 FOXL1Q12952 345 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 KLF10Q13118 480 aa6.27□□□□□ -1.41
CDK5RAP3-209ENST00000578663 DPY19L1Q2PZI1 675 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms