RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 THY1P04216 161 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 GUSBP08236 651 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 ZNF136P52737 540 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 FOXD4Q12950 439 aaPredicted RBP7.1□□□□□ -1.27
CCDC40-215ENST00000576033 BLMHQ13867 455 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 SNTB1Q13884 538 aaKnown RBP7.1□□□□□ -1.27
CCDC40-215ENST00000576033 CBFBQ13951 182 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 GANABQ14697 944 aaKnown RBP7.1□□□□□ -1.27
CCDC40-215ENST00000576033 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.1□□□□□ -1.27
CCDC40-215ENST00000576033 UGT2A3Q6UWM9 527 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 B3GNT6Q6ZMB0 384 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.1□□□□□ -1.27
CCDC40-215ENST00000576033 VTCN1Q7Z7D3 282 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 CARM1Q86X55 608 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 SLC30A8Q8IWU4 369 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 CADM2Q8N3J6 435 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 RELL2Q8NC24 303 aaPredicted RBP7.1□□□□□ -1.27
CCDC40-215ENST00000576033 ICA1LQ8NDH6 482 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 TOR1AIP2Q8NFQ8 470 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 OR10D3Q8NH80 312 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 ZNF563Q8TA94 476 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 FNDC9Q8TBE3 224 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 SSC4DQ8WTU2 575 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 SARAFQ96BY9 339 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 SLC47A1Q96FL8 570 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 C7orf34Q96L11 122 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 SEPHS2Q99611 448 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 CIB1Q99828 191 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 PIGQQ9BRB3 760 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 TTYH2Q9BSA4 534 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 BDH2Q9BUT1 245 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 C9orf16Q9BUW7 83 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 PINK1Q9BXM7 581 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 GABARAPL1Q9H0R8 117 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 VCXQ9H320 206 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 PTGES2Q9H7Z7 377 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 MTHFD2LQ9H903 347 aaPredicted RBP7.1□□□□□ -1.27
CCDC40-215ENST00000576033 IL1RAPQ9NPH3 570 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.1□□□□□ -1.27
CCDC40-215ENST00000576033 USE1Q9NZ43 259 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 CLCF1Q9UBD9 225 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 DNAJB9Q9UBS3 223 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 SEC14L4Q9UDX3 406 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 RPS6KA6Q9UK32 745 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 OAZ3Q9UMX2 235 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 RNF6Q9Y252 685 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 ANGPT4Q9Y264 503 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 SLC35A3Q9Y2D2 325 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 AP4B1Q9Y6B7 739 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 V9GYQ6 96 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 INTS1Q8N201 2190 aaKnown RBP7.1□□□□□ -1.27
CCDC40-215ENST00000576033 CELSR2Q9HCU4 2923 aa7.1□□□□□ -1.27
CCDC40-215ENST00000576033 TMEM247A6NEH6 219 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 FIGNL2A6NMB9 653 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 CYSRT1A8MQ03 144 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 ACTL6AO96019 429 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 HPRP00739 348 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 THBS1P07996 1170 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 RPSAP08865 295 aaKnown RBP7.09□□□□□ -1.27
CCDC40-215ENST00000576033 ZNF17P17021 662 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 CHMP24386 653 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 EDNRAP25101 427 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 MSX1P28360 303 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 TACR3P29371 465 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 EIF1AXP47813 144 aaKnown RBP7.09□□□□□ -1.27
CCDC40-215ENST00000576033 OR1E2P47887 323 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 SUMO3P55854 103 aaPredicted RBP7.09□□□□□ -1.27
CCDC40-215ENST00000576033 SIRPAP78324 504 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 PPP2R2BQ00005 443 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 PON3Q15166 354 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 SLC25A53Q5H9E4 307 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 AP1ARQ63HQ0 302 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 DHRS4L2Q6PKH6 230 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 WDR88Q6ZMY6 472 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 ZBTB49Q6ZSB9 765 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 TSEN54Q7Z6J9 526 aaKnown RBP7.09□□□□□ -1.27
CCDC40-215ENST00000576033 MRGPRGQ86SM5 289 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 ADGRE4PQ86SQ3 457 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 ARMC8Q8IUR7 673 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 CBR4Q8N4T8 237 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 METTL25Q8N6Q8 603 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 OR6T1Q8NGN1 323 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 ROBO4Q8WZ75 1007 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 TFAP2CQ92754 450 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 ZBTB8AQ96BR9 441 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 C3orf49Q96BT1 292 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 SDCCAG3Q96C92 435 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 ARL5BQ96KC2 179 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 KLHL15Q96M94 604 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 UCN2Q96RP3 112 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 ARHGDIGQ99819 225 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 ANKRD60Q9BZ19 345 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 TP63Q9H3D4 680 aaPredicted RBP7.09□□□□□ -1.27
CCDC40-215ENST00000576033 EXOSC3Q9NQT5 275 aaKnown RBP7.09□□□□□ -1.27
CCDC40-215ENST00000576033 RYDENQ9NUL5 291 aaKnown RBP7.09□□□□□ -1.27
CCDC40-215ENST00000576033 THUMPD1Q9NXG2 353 aaKnown RBP7.09□□□□□ -1.27
CCDC40-215ENST00000576033 UBAP1Q9NZ09 502 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 CALML5Q9NZT1 146 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 OSGIN1Q9UJX0 560 aa7.09□□□□□ -1.27
CCDC40-215ENST00000576033 MRPS18CQ9Y3D5 142 aaKnown RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms