RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 SMIM11AP58511 58 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 C3AR1Q16581 482 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 C10orf67Q8IYJ2 551 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 PAPD5Q8NDF8 572 aaKnown RBP15.36■□□□□ 0.05
NUP88-210ENST00000574867 OR5M9Q8NGP3 310 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 ZPLD1Q8TCW7 415 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 DUS3LQ96G46 650 aaKnown RBP15.36■□□□□ 0.05
NUP88-210ENST00000574867 DHRS1Q96LJ7 313 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 HS6ST2Q96MM7 605 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 OR5B2Q96R09 309 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 EPYCQ99645 322 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 PRSS27Q9BQR3 290 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 CHID1Q9BWS9 393 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 OR11A1Q9GZK7 315 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 TP63Q9H3D4 680 aaPredicted RBP15.36■□□□□ 0.05
NUP88-210ENST00000574867 NMNAT1Q9HAN9 279 aaPredicted RBP15.36■□□□□ 0.05
NUP88-210ENST00000574867 TIGARQ9NQ88 270 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 GTF3C1Q12789 2109 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 A0A0J9YW62 118 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 A0A1W2PRQ8 180 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 ZNHIT1O43257 154 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 DIRAS1O95057 198 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 OPN1LWP04000 364 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 H1F0P07305 194 aaKnown RBP15.36■□□□□ 0.05
NUP88-210ENST00000574867 HOXD4P09016 255 aaPredicted RBP15.36■□□□□ 0.05
NUP88-210ENST00000574867 DGCR6Q14129 220 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 EMC4Q5J8M3 183 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 C1orf140Q5VVS0 124 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 HBMQ6B0K9 141 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 TTC33Q6PID6 262 aaPredicted RBP15.36■□□□□ 0.05
NUP88-210ENST00000574867 WDR88Q6ZMY6 472 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 CHMP1BQ7LBR1 199 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 OR10D3Q8NH80 312 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 COQ10BQ9H8M1 238 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 MAN2C1Q9NTJ4 1040 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 RHCGQ9UBD6 479 aa15.36■□□□□ 0.05
NUP88-210ENST00000574867 IGKV1D-42A0A075B6H8 117 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 ZC3H12DA2A288 527 aaKnown RBP15.35■□□□□ 0.05
NUP88-210ENST00000574867 H0YC42 278 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 TNFSF11O14788 317 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 FKBP6O75344 327 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 AHSA1O95433 338 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 PMS2P2O95744 297 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 MT-ND1P03886 318 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 IDUAP35475 653 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 TPD52P55327 224 aaPredicted RBP15.35■□□□□ 0.05
NUP88-210ENST00000574867 CLDN15P56746 228 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 CSNK2A1P68400 391 aaPredicted RBP15.35■□□□□ 0.05
NUP88-210ENST00000574867 SPIBQ01892 262 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 MYBPHQ13203 477 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 TMPPEQ6ZT21 453 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 NKAIN4Q8IVV8 208 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 ARL5BQ96KC2 179 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 DENND2DQ9H6A0 471 aaPredicted RBP15.35■□□□□ 0.05
NUP88-210ENST00000574867 TRAPPC4Q9Y296 219 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 TESMINQ9Y4I5 508 aa15.35■□□□□ 0.05
NUP88-210ENST00000574867 DNPH1O43598 174 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 EIF1AXP47813 144 aaKnown RBP15.34■□□□□ 0.05
NUP88-210ENST00000574867 EGR4Q05215 589 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 MRPL49Q13405 166 aaKnown RBP15.34■□□□□ 0.05
NUP88-210ENST00000574867 ZNF585AQ6P3V2 769 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 OR6S1Q8NH40 331 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 TMEM255BQ8WV15 326 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 TMEM239Q8WW34 195 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 CPNE4Q96A23 557 aaPredicted RBP15.34■□□□□ 0.05
NUP88-210ENST00000574867 SLCO4A1Q96BD0 722 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 TUBA1CQ9BQE3 449 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 ARMC1Q9NVT9 282 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 MPDZO75970 2070 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 TRAV36DV7A0A075B6V5 113 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 A0A1W2PNR3 127 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 SULT2B1O00204 365 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 OR2T1O43869 369 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 KRT36O76013 467 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 GADD45GO95257 159 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 IGF2P01344 180 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 STSP08842 583 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 ACVR2AP27037 513 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 RRM2P31350 389 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 DIO1P49895 249 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 CARD18P57730 90 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 RAC3P60763 192 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 IGFBP7Q16270 282 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 SGCBQ16585 318 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 ACSF3Q4G176 576 aaPredicted RBP15.34■□□□□ 0.05
NUP88-210ENST00000574867 OR2T5Q6IEZ7 315 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 ADGRE4PQ86SQ3 457 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 DOLPP1Q86YN1 238 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 OR2T29Q8NH02 315 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 ACOT11Q8WXI4 607 aaPredicted RBP15.34■□□□□ 0.05
NUP88-210ENST00000574867 TAPBPLQ9BX59 468 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 KLHL4Q9C0H6 718 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 ALKBH4Q9NXW9 302 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 OSGIN2Q9Y236 505 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 ZNF175Q9Y473 711 aa15.34■□□□□ 0.05
NUP88-210ENST00000574867 HTR3EA5X5Y0 456 aa15.33■□□□□ 0.04
NUP88-210ENST00000574867 CXCL13O43927 109 aa15.33■□□□□ 0.04
NUP88-210ENST00000574867 CA7P43166 264 aa15.33■□□□□ 0.04
NUP88-210ENST00000574867 GK3PQ14409 553 aa15.33■□□□□ 0.04
NUP88-210ENST00000574867 FGD3Q5JSP0 725 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms