RNA–Protein interactions for RNA: ENST00000574776.5

CTNS-209, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 4

Gene CTNS, Length 565 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-209ENST00000574776 POU2F3Q9UKI9 436 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 MGAT4BQ9UQ53 548 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 TRAPPC4Q9Y296 219 aa13.39□□□□□ -0.27
CTNS-209ENST00000574776 TMED7-TICAM2A0A0A6YYA0 188 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 CCDC154A6NI56 674 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 M0R1B8 84 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 RGS16O15492 202 aaPredicted RBP13.38□□□□□ -0.27
CTNS-209ENST00000574776 DNPH1O43598 174 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 CD5LO43866 347 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 BGNP21810 368 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 PTAFRP25105 342 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 CD40P25942 277 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 SLC16A1P53985 500 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 CLNS1AP54105 237 aaKnown RBP13.38□□□□□ -0.27
CTNS-209ENST00000574776 UFM1P61960 85 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 IRX1P78414 480 aaPredicted RBP13.38□□□□□ -0.27
CTNS-209ENST00000574776 HPCAP84074 193 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 H3F3AP84243 136 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 SPOCK1Q08629 439 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 MPP2Q14168 576 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 GABRA6Q16445 453 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 C9orf135Q5VTT2 229 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 KLHL17Q6TDP4 642 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 HTRA1Q92743 480 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 ZBTB9Q96C00 473 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 ADAD1Q96M93 576 aaKnown RBP13.38□□□□□ -0.27
CTNS-209ENST00000574776 CCDC115Q96NT0 180 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 DHRS9Q9BPW9 319 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 INPP5KQ9BT40 448 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 CACNG6Q9BXT2 260 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 TAS2R16Q9NYV7 291 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 BTNL2Q9UIR0 455 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 OSGIN1Q9UJX0 560 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 TMED7Q9Y3B3 224 aa13.38□□□□□ -0.27
CTNS-209ENST00000574776 IGHV4-30-2A0A087WSY4 118 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 TMEM72A0PK05 275 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 AGAP5A6NIR3 686 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 E9PBE3 544 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 TLX2O43763 284 aaPredicted RBP13.37□□□□□ -0.27
CTNS-209ENST00000574776 GPRIN2O60269 458 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 GSNP06396 782 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 CHRM4P08173 479 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 ITGA5P08648 1049 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 DHRS4L1P0CG22 281 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 IMPDH2P12268 514 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 TACR3P29371 465 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 HTR3AP46098 478 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 FABP6P51161 128 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 POLR2HP52434 150 aaKnown RBP13.37□□□□□ -0.27
CTNS-209ENST00000574776 NUDT6P53370 316 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 SLC35A1P78382 337 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 STX3Q13277 289 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 NRF1Q16656 503 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 DPY19L1Q2PZI1 675 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 OR7E24Q6IFN5 339 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 HMBOX1Q6NT76 420 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 WDR93Q6P2C0 686 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 ZNF621Q6ZSS3 439 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 FBXL14Q8N1E6 418 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 WDR31Q8NA23 367 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 SPATA3Q8NHX4 192 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 PMM1Q92871 262 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 DDIT4LQ96D03 193 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 TRNT1Q96Q11 434 aaKnown RBP13.37□□□□□ -0.27
CTNS-209ENST00000574776 NAA11Q9BSU3 229 aaPredicted RBP13.37□□□□□ -0.27
CTNS-209ENST00000574776 SLC38A1Q9H2H9 487 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 MTHFD2LQ9H903 347 aaPredicted RBP13.37□□□□□ -0.27
CTNS-209ENST00000574776 MEAF6Q9HAF1 191 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 KCNK9Q9NPC2 374 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 CBLN4Q9NTU7 201 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 PARPBPQ9NWS1 579 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 UPB1Q9UBR1 384 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 MALT1Q9UDY8 824 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.37□□□□□ -0.27
CTNS-209ENST00000574776 HAO1Q9UJM8 370 aa13.37□□□□□ -0.27
CTNS-209ENST00000574776 V9GYY5 206 aaPredicted RBP13.37□□□□□ -0.27
CTNS-209ENST00000574776 MXRA5Q9NR99 2828 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 ZC3H12DA2A288 527 aaKnown RBP13.36□□□□□ -0.27
CTNS-209ENST00000574776 FAM234BA2RU67 622 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 TM9SF1O15321 606 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 EIF1BO60739 113 aaKnown RBP13.36□□□□□ -0.27
CTNS-209ENST00000574776 SNUPNO95149 360 aaKnown RBP13.36□□□□□ -0.27
CTNS-209ENST00000574776 ALDOCP09972 364 aaKnown RBP13.36□□□□□ -0.27
CTNS-209ENST00000574776 IL7RP16871 459 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 IL12AP29459 219 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 CDKN2CP42773 168 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 SLC1A3P43003 542 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 RAB35Q15286 201 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 COX20Q5RI15 118 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 C11orf71Q6IPW1 123 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 CASP12Q6UXS9 341 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 B3GLCTQ6Y288 498 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 LRRC74BQ6ZQY2 392 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 HIPK1Q86Z02 1210 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 CMIPQ8IY22 773 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 LRRC34Q8IZ02 419 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 DEPDC4Q8N2C3 294 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 MUC15Q8N387 334 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 OR52E6Q96RD3 313 aa13.36□□□□□ -0.27
CTNS-209ENST00000574776 PANX1Q96RD7 426 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms