RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 IMPDH2P12268 514 aa23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 ACAA2P42765 397 aaKnown RBP23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 CAPRIN1Q14444 709 aaKnown RBP23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 HDXQ7Z353 690 aa23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 P3H2Q8IVL5 708 aa23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 CLIP4Q8N3C7 705 aa23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 HSD17B8Q92506 261 aa23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 ADAM19Q9H013 955 aa23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 THUMPD1Q9NXG2 353 aaKnown RBP23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 NOSIPQ9Y314 301 aaKnown RBP23.05■■□□□ 1.28
NPLOC4-215ENST00000574095 MTORP42345 2549 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 A0A096LPI6 279 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 TMEM247A6NEH6 219 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 DNPH1O43598 174 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 IGHV3-9P01782 118 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 HOXB9P17482 250 aaPredicted RBP23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 IGHV1-2P23083 117 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 NTF4P34130 210 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 SHEQ5VZ18 495 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 BLOC1S3Q6QNY0 202 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 CADM2Q8N3J6 435 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 GOLGA6L1Q8N7Z2 621 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 PIGXQ8TBF5 258 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 MAL2Q969L2 176 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 SPDL1Q96EA4 605 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 TMEM204Q9BSN7 226 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 INTS9Q9NV88 658 aaKnown RBP23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 SLC25A37Q9NYZ2 338 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 SLAMF8Q9P0V8 285 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 ZNF232Q9UNY5 417 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 CHST2Q9Y4C5 530 aa23.04■■□□□ 1.28
NPLOC4-215ENST00000574095 C2CD3Q4AC94 2353 aa23.03■■□□□ 1.28
NPLOC4-215ENST00000574095 NR5A2O00482 541 aa23.03■■□□□ 1.28
NPLOC4-215ENST00000574095 PRG2P13727 222 aa23.03■■□□□ 1.28
NPLOC4-215ENST00000574095 CXCR1P25024 350 aa23.03■■□□□ 1.28
NPLOC4-215ENST00000574095 SLC35A1P78382 337 aa23.03■■□□□ 1.28
NPLOC4-215ENST00000574095 H3F3AP84243 136 aa23.03■■□□□ 1.28
NPLOC4-215ENST00000574095 LARS2Q15031 903 aaKnown RBP23.03■■□□□ 1.28
NPLOC4-215ENST00000574095 STK11Q15831 433 aa23.03■■□□□ 1.28
NPLOC4-215ENST00000574095 LRRC75A-AS1Q8N1F1 130 aa23.03■■□□□ 1.28
NPLOC4-215ENST00000574095 RAD21L1Q9H4I0 556 aa23.03■■□□□ 1.28
NPLOC4-215ENST00000574095 GSX1Q9H4S2 264 aaPredicted RBP23.03■■□□□ 1.28
NPLOC4-215ENST00000574095 SETD2Q9BYW2 2564 aaPredicted RBP23.03■■□□□ 1.28
NPLOC4-215ENST00000574095 FLNAP21333 2647 aaKnown RBP23.03■■□□□ 1.28
NPLOC4-215ENST00000574095 ARID1AO14497 2285 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 HMGB1P1B2RPK0 211 aaPredicted RBP23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 ARHGEF9O43307 516 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 THBS1P07996 1170 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 FADDQ13158 208 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 PAGE3Q5JUK9 113 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 Q5PR19 223 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 NCMAPQ5T1S8 102 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 RNF220Q5VTB9 566 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 ATG4DQ86TL0 474 aaPredicted RBP23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 MSRB3Q8IXL7 192 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 UBE2J2Q8N2K1 259 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 AKAP1Q92667 903 aaKnown RBP eCLIP23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 PERPQ96FX8 193 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 SPATA9Q9BWV2 254 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 POTEKPQ9BYX7 375 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 A4GALTQ9NPC4 353 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 NGBQ9NPG2 151 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 SLC52A3Q9NQ40 469 aa23.02■■□□□ 1.28
NPLOC4-215ENST00000574095 ZFHX3Q15911 3703 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 GPR171O14626 319 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 BMP2P12643 396 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 FOSL1P15407 271 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 MAP2K6P52564 334 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 SLC16A1P53985 500 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 COPZ1P61923 177 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 BNIP2Q12982 314 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 AGKQ53H12 422 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 ZNF311Q5JNZ3 666 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 LRIF1Q5T3J3 769 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 FBXW9Q5XUX1 488 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 WBP2NLQ6ICG8 309 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 SERPINA11Q86U17 422 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 APH1AQ96BI3 265 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 THOC1Q96FV9 657 aaKnown RBP23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 USB1Q9BQ65 265 aaKnown RBP23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 NAA11Q9BSU3 229 aaPredicted RBP23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 ESRP2Q9H6T0 727 aaKnown RBP23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 CACYBPQ9HB71 228 aaKnown RBP23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 BCL2L10Q9HD36 194 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 IFT52Q9Y366 437 aa23.01■■□□□ 1.27
NPLOC4-215ENST00000574095 HS3ST1O14792 307 aa23■■□□□ 1.27
NPLOC4-215ENST00000574095 CLOCKO15516 846 aa23■■□□□ 1.27
NPLOC4-215ENST00000574095 EIF1BO60739 113 aaKnown RBP23■■□□□ 1.27
NPLOC4-215ENST00000574095 MRPL33O75394 65 aaKnown RBP23■■□□□ 1.27
NPLOC4-215ENST00000574095 CNOT4O95628 575 aaKnown RBP23■■□□□ 1.27
NPLOC4-215ENST00000574095 NCF2P19878 526 aaPredicted RBP23■■□□□ 1.27
NPLOC4-215ENST00000574095 COX5AP20674 150 aa23■■□□□ 1.27
NPLOC4-215ENST00000574095 CEACAM7Q14002 265 aa23■■□□□ 1.27
NPLOC4-215ENST00000574095 ZSWIM7Q19AV6 140 aa23■■□□□ 1.27
NPLOC4-215ENST00000574095 SEZ6L2Q6UXD5 910 aa23■■□□□ 1.27
NPLOC4-215ENST00000574095 C10orf111Q8N326 155 aa23■■□□□ 1.27
NPLOC4-215ENST00000574095 ZNF433Q8N7K0 673 aaPredicted RBP23■■□□□ 1.27
NPLOC4-215ENST00000574095 LILRB1Q8NHL6 650 aaPredicted RBP23■■□□□ 1.27
NPLOC4-215ENST00000574095 CKAP2Q8WWK9 683 aa23■■□□□ 1.27
NPLOC4-215ENST00000574095 ARGLU1Q9NWB6 273 aaPredicted RBP23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms