RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 CPOXP36551 454 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 GSK3BP49841 420 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 ZNF136P52737 540 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 NRF1Q16656 503 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 ZSCAN26Q16670 478 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 SLC25A35Q3KQZ1 300 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 GLIPR1L2Q4G1C9 344 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 SAMD4BQ5PRF9 694 aaKnown RBP9.89□□□□□ -0.83
CHD3-216ENST00000573936 PPP4R4Q6NUP7 873 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 TMPPEQ6ZT21 453 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 CCDC71Q8IV32 467 aaPredicted RBP9.89□□□□□ -0.83
CHD3-216ENST00000573936 SLC43A2Q8N370 569 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 RBM15BQ8NDT2 890 aaKnown RBP9.89□□□□□ -0.83
CHD3-216ENST00000573936 TAMM41Q96BW9 452 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 SLC7A6OSQ96CW6 309 aaPredicted RBP9.89□□□□□ -0.83
CHD3-216ENST00000573936 ZHX1-C8orf76Q96EF9 292 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 LRRC46Q96FV0 321 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 ZNF845Q96IR2 970 aaPredicted RBP9.89□□□□□ -0.83
CHD3-216ENST00000573936 ARHGDIGQ99819 225 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 SFXN3Q9BWM7 321 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 POTEKPQ9BYX7 375 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 KCNJ16Q9NPI9 418 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 GLRX2Q9NS18 164 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 ADPRHL2Q9NX46 363 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 USP22Q9UPT9 525 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 TRAPPC4Q9Y296 219 aa9.89□□□□□ -0.83
CHD3-216ENST00000573936 FREM3P0C091 2139 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 TMEM72A0PK05 275 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 A8MVM7 634 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 KDM4EB2RXH2 506 aaPredicted RBP9.88□□□□□ -0.83
CHD3-216ENST00000573936 SULT2B1O00204 365 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 CXCR6O00574 342 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 FRS3O43559 492 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 DNPH1O43598 174 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 ATP5HO75947 161 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 PMS2P2O95744 297 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 TGM6O95932 706 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 PNMTP11086 282 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 CCNA2P20248 432 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 ENPP1P22413 925 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 SHC1P29353 583 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 SELENOWP63302 87 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 SLC25A3Q00325 362 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 HOXC5Q00444 222 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 OR1Q1Q15612 314 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 LRRC23Q53EV4 343 aaPredicted RBP9.88□□□□□ -0.83
CHD3-216ENST00000573936 ULK3Q6PHR2 472 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 C5orf46Q6UWT4 87 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 ATG4DQ86TL0 474 aaPredicted RBP9.88□□□□□ -0.83
CHD3-216ENST00000573936 DEFB107AQ8IZN7 70 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 ARHGAP24Q8N264 748 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 GPR32P1Q8NGA4 272 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 FNDC9Q8TBE3 224 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 STK35Q8TDR2 534 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 FIG4Q92562 907 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 C3orf49Q96BT1 292 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 INTS12Q96CB8 462 aaKnown RBP9.88□□□□□ -0.83
CHD3-216ENST00000573936 SLC47A1Q96FL8 570 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 LURAP1Q96LR2 239 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 CDRT15Q96T59 188 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 MCHR1Q99705 422 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 RSPO3Q9BXY4 272 aaPredicted RBP9.88□□□□□ -0.83
CHD3-216ENST00000573936 POLR2J2Q9GZM3 115 aaKnown RBP9.88□□□□□ -0.83
CHD3-216ENST00000573936 POLR2J3Q9H1A7 115 aaKnown RBP9.88□□□□□ -0.83
CHD3-216ENST00000573936 PIGMQ9H3S5 423 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 COQ10BQ9H8M1 238 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 RNF122Q9H9V4 155 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 TAS2R1Q9NYW7 299 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 HIVEP1P15822 2718 aa9.88□□□□□ -0.83
CHD3-216ENST00000573936 DNAJC13O75165 2243 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 PCNX3Q9H6A9 2034 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 A0A1B0GWA3 101 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 A0A1W2PNR3 127 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 ELOA3DA6NLF2 546 aaPredicted RBP9.87□□□□□ -0.83
CHD3-216ENST00000573936 M0R3H8 397 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 EIF1BO60739 113 aaKnown RBP9.87□□□□□ -0.83
CHD3-216ENST00000573936 PRKD3O94806 890 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 PLGP00747 810 aaPredicted RBP9.87□□□□□ -0.83
CHD3-216ENST00000573936 HSD17B1P14061 328 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 GGT1P19440 569 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 IFNA8P32881 189 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 DIO1P49895 249 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 SLC35A1P78382 337 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 RNPS1Q15287 305 aaKnown RBP9.87□□□□□ -0.83
CHD3-216ENST00000573936 ZNF239Q16600 458 aaKnown RBP9.87□□□□□ -0.83
CHD3-216ENST00000573936 ELOA3BQ3SY89 546 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 CYBRD1Q53TN4 286 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 ALG10BQ5I7T1 473 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 SWT1Q5T5J6 900 aaKnown RBP9.87□□□□□ -0.83
CHD3-216ENST00000573936 GLYATQ6IB77 296 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 ZNF613Q6PF04 617 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 CBLL1Q75N03 491 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 FCRLAQ7L513 359 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 YTHDF3Q7Z739 585 aaKnown RBP9.87□□□□□ -0.83
CHD3-216ENST00000573936 COMTD1Q86VU5 262 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 NAXEQ8NCW5 288 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 ELOA3Q8NG57 546 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 FAM162AQ96A26 154 aa9.87□□□□□ -0.83
CHD3-216ENST00000573936 GMPPAQ96IJ6 420 aaPredicted RBP9.87□□□□□ -0.83
CHD3-216ENST00000573936 TACO1Q9BSH4 297 aaKnown RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms