RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 ASZ1Q8WWH4 475 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 ESAMQ96AP7 390 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 ZHX1-C8orf76Q96EF9 292 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 COL21A1Q96P44 957 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 VPS35Q96QK1 796 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 PANX1Q96RD7 426 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 HBEGFQ99075 208 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 MAPKAP1Q9BPZ7 522 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 DOHHQ9BU89 302 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 EFCAB11Q9BUY7 163 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 CCDC32Q9BV29 185 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 CDCA4Q9BXL8 241 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 DSN1Q9H410 356 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 CCDC177Q9NQR7 707 aaPredicted RBP4.38□□□□□ -1.71
CDC27-215ENST00000573550 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.38□□□□□ -1.71
CDC27-215ENST00000573550 FARSBQ9NSD9 589 aaKnown RBP4.38□□□□□ -1.71
CDC27-215ENST00000573550 THUMPD1Q9NXG2 353 aaKnown RBP4.38□□□□□ -1.71
CDC27-215ENST00000573550 VNN3Q9NY84 501 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 VPS29Q9UBQ0 182 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 SEC14L4Q9UDX3 406 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 ATP6V1HQ9UI12 483 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 PSORS1C1Q9UIG5 152 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 ABCG2Q9UNQ0 655 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 FAM32AQ9Y421 112 aaKnown RBP4.38□□□□□ -1.71
CDC27-215ENST00000573550 TMEM184BQ9Y519 407 aaPredicted RBP4.38□□□□□ -1.71
CDC27-215ENST00000573550 MAGED1Q9Y5V3 778 aaPredicted RBP4.38□□□□□ -1.71
CDC27-215ENST00000573550 PEX16Q9Y5Y5 336 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 PRSS21Q9Y6M0 314 aa4.38□□□□□ -1.71
CDC27-215ENST00000573550 KIAA1549LQ6ZVL6 1849 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 DENND4AQ7Z401 1863 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 NUP210Q8TEM1 1887 aaPredicted RBP4.37□□□□□ -1.71
CDC27-215ENST00000573550 A0A075B6Q4 140 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 OR5K3A6NET4 321 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 A8MZ25 164 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 EFCAB9A8MZ26 197 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 F5H0A9 414 aaPredicted RBP4.37□□□□□ -1.71
CDC27-215ENST00000573550 LOC110117498-PIK3R3F6TDL0 507 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 TMEM178BH3BS89 294 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 PSMD11O00231 422 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 TBX19O60806 448 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 ZNF821O75541 412 aaPredicted RBP4.37□□□□□ -1.71
CDC27-215ENST00000573550 WISP2O76076 250 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 SEMA3DO95025 777 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 SEC24AO95486 1093 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 PRAMEF12O95522 483 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 OXSR1O95747 527 aaPredicted RBP4.37□□□□□ -1.71
CDC27-215ENST00000573550 FGF19O95750 216 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 ZNF682O95780 498 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 SCGB1D1O95968 90 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 MT-ND2P03891 347 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 CATP04040 527 aaKnown RBP4.37□□□□□ -1.71
CDC27-215ENST00000573550 RPLP0P05388 317 aaKnown RBP4.37□□□□□ -1.71
CDC27-215ENST00000573550 CDK1P06493 297 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 ALPIP09923 528 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 TFPTP0C1Z6 253 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 TRAPPC2P0DI81 140 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 TRAPPC2BP0DI82 140 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 ATP1B2P14415 290 aaPredicted RBP4.37□□□□□ -1.71
CDC27-215ENST00000573550 GABRB1P18505 474 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 PSMB9P28065 219 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 CCND3P30281 292 aaPredicted RBP4.37□□□□□ -1.71
CDC27-215ENST00000573550 SERPINB1P30740 379 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 TIA1P31483 386 aaKnown RBP eCLIP4.37□□□□□ -1.711e-6■■□□□ 12.3
CDC27-215ENST00000573550 CCR7P32248 378 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 OR1D2P34982 312 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 TIMP3P35625 211 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 GLIPR1P48060 266 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 SPINT3P49223 89 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 HOXA1P49639 335 aaPredicted RBP4.37□□□□□ -1.71
CDC27-215ENST00000573550 PRLHRP49683 370 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 ARPP19P56211 112 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 DEFA1P59665 94 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 DEFA3P59666 94 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 SELENOWP63302 87 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 KCNJ10P78508 379 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 RPL24P83731 157 aaKnown RBP4.37□□□□□ -1.71
CDC27-215ENST00000573550 ZNF763Q0D2J5 394 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 GAGE5Q13069 117 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 GAGE6Q13070 117 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 RGNQ15493 299 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 INAQ16352 499 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 C18orf21Q32NC0 220 aaPredicted RBP4.37□□□□□ -1.71
CDC27-215ENST00000573550 GTDC1Q4AE62 458 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 IFI44LQ53G44 452 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 CARD16Q5EG05 197 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 PDSS1Q5T2R2 415 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 ATAD3BQ5T9A4 648 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 FAM219BQ5XKK7 198 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 LRRC66Q68CR7 880 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 PMS2CLQ68D20 193 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 PNCKQ6P2M8 343 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 TRIM40Q6P9F5 258 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 DOK6Q6PKX4 331 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 LINGO4Q6UY18 593 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 TMEM150AQ86TG1 271 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 PLD3Q8IV08 490 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 CCDC71Q8IV32 467 aaPredicted RBP4.37□□□□□ -1.71
CDC27-215ENST00000573550 ENTHD1Q8IYW4 607 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 HS3ST5Q8IZT8 346 aa4.37□□□□□ -1.71
CDC27-215ENST00000573550 TRAM1L1Q8N609 369 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms