RNA–Protein interactions for RNA: ENST00000573166.5

SMG6-213, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best)

Gene SMG6, Length 4,236 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-213ENST00000573166 TRAV17A0A0B4J275 112 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 DENRO43583 198 aaKnown RBP9.28□□□□□ -0.92
SMG6-213ENST00000573166 FUT4P22083 530 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 ELAVL4P26378 380 aaKnown RBP9.28□□□□□ -0.92
SMG6-213ENST00000573166 AQP2P41181 271 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 PPIAP62937 165 aaKnown RBP9.28□□□□□ -0.92
SMG6-213ENST00000573166 FOXK1P85037 733 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 TSPAN31Q12999 210 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 EBPQ15125 230 aaKnown RBP9.28□□□□□ -0.92
SMG6-213ENST00000573166 ZER1Q7Z7L7 766 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 LHFPL3Q86UP9 236 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 OR10G3Q8NGC4 313 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 TMEM80Q96HE8 168 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 EMC3Q9P0I2 261 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 CHRNA9Q9UGM1 479 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 KLHL21Q9UJP4 597 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 NTNG1Q9Y2I2 539 aa9.28□□□□□ -0.92
SMG6-213ENST00000573166 TCRBV16S1A1N1A0A5B0 115 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 A6NIZ1 184 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 GIPRP48546 466 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 CSNK1A1P48729 337 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 MRPL19P49406 292 aaKnown RBP9.27□□□□□ -0.92
SMG6-213ENST00000573166 RAP1BP61224 184 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 RAP1AP62834 184 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 SLC35A1P78382 337 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 GALK2Q01415 458 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 GLYR1Q49A26 553 aaPredicted RBP9.27□□□□□ -0.92
SMG6-213ENST00000573166 B3GNTL1Q67FW5 361 aaPredicted RBP9.27□□□□□ -0.92
SMG6-213ENST00000573166 PLEKHG7Q6ZR37 379 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 NKAIN4Q8IVV8 208 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 S100ZQ8WXG8 99 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 TRIM63Q969Q1 353 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 TMEM203Q969S6 136 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 TNFRSF13CQ96RJ3 184 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 COL25A1Q9BXS0 654 aaPredicted RBP9.27□□□□□ -0.92
SMG6-213ENST00000573166 MROQ9BYG7 248 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 LAT2Q9GZY6 243 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 TRIM36Q9NQ86 728 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 SIRT3Q9NTG7 399 aaPredicted RBP9.27□□□□□ -0.92
SMG6-213ENST00000573166 OLAHQ9NV23 265 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 PCDHGA6Q9Y5G7 932 aa9.27□□□□□ -0.92
SMG6-213ENST00000573166 M0R129 80 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 HRKO00198 91 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 MRPL33O75394 65 aaKnown RBP9.27□□□□□ -0.93
SMG6-213ENST00000573166 GASTP01350 101 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 H2BFMP0C1H6 154 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 SLC3A1Q07837 685 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 APOFQ13790 326 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 RSPO4Q2I0M5 234 aaPredicted RBP9.27□□□□□ -0.93
SMG6-213ENST00000573166 C1orf140Q5VVS0 124 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 HBMQ6B0K9 141 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 C3orf33Q6P1S2 294 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 TMPPEQ6ZT21 453 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 MBOAT2Q6ZWT7 520 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 MRGPREQ86SM8 312 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 ZNF554Q86TJ5 538 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 P2RY8Q86VZ1 359 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 SNX29P2Q8IUI4 249 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 OR11G2Q8NGC1 345 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 SLC7A13Q8TCU3 470 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 SLC25A43Q8WUT9 341 aaPredicted RBP9.27□□□□□ -0.93
SMG6-213ENST00000573166 ISOC1Q96CN7 298 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 PITX2Q99697 317 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 TM9SF2Q99805 663 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 DDA1Q9BW61 102 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 CORINQ9Y5Q5 1042 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 AIREO43918 545 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 CRABP1P29762 137 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 MTNR1AP48039 350 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 FAM69AQ5T7M9 428 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 LIN37Q96GY3 246 aaPredicted RBP9.27□□□□□ -0.93
SMG6-213ENST00000573166 ZNF764Q96H86 408 aaPredicted RBP9.27□□□□□ -0.93
SMG6-213ENST00000573166 KATNB1Q9BVA0 655 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 ZNF350Q9GZX5 532 aa9.27□□□□□ -0.93
SMG6-213ENST00000573166 MT-ND5P03915 603 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 LCN1P31025 176 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 APOBEC1P41238 236 aaKnown RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 C21orf58P58505 322 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 INSM1Q01101 510 aaPredicted RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 TGFBR3Q03167 851 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 MADCAM1Q13477 382 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 LRFN4Q6PJG9 635 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 FGD2Q7Z6J4 655 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 ACBD7Q8N6N7 88 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 OR4C15Q8NGM1 316 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 HDAC2Q92769 488 aaKnown RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 ZMYND19Q96E35 227 aaPredicted RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 EGLN3Q9H6Z9 239 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 AASSQ9UDR5 926 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 TMA7Q9Y2S6 64 aaKnown RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 DOCK9Q9BZ29 2069 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 A0A1W2PQ72 361 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 FAM183AA6NL82 134 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 ZNF99A8MXY4 864 aaPredicted RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 H0YJX3 145 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 SLC16A7O60669 478 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 EIF1BO60739 113 aaKnown RBP9.26□□□□□ -0.93
SMG6-213ENST00000573166 WDPCPO95876 746 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 HPP00738 406 aa9.26□□□□□ -0.93
SMG6-213ENST00000573166 HTR1AP08908 422 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms