RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 HSPA13P48723 471 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 HTR6P50406 440 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 PDLIM4P50479 330 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 EEF1A1P68104 462 aaKnown RBP4.76□□□□□ -1.65
SF3B3-214ENST00000572365 BASP1P80723 227 aaKnown RBP4.76□□□□□ -1.65
SF3B3-214ENST00000572365 DEFA6Q01524 100 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 CDR2Q01850 454 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 GUCY2DQ02846 1103 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 RELQ04864 619 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-214ENST00000572365 MED21Q13503 144 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 CAMK2DQ13557 499 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 DPYSQ14117 519 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 CHRFAM7AQ494W8 412 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 PDLIM3Q53GG5 364 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-214ENST00000572365 GCNT6Q5T4J0 391 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 GPRC6AQ5T6X5 926 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 EEF1A1P5Q5VTE0 462 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 FRMPD2BQ6IN97 320 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 TTC23LQ6PF05 361 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 DCUN1D2Q6PH85 259 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 BHLHB9Q6PI77 547 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 CREB3L2Q70SY1 520 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 ARCQ7LC44 396 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 EXOC3L1Q86VI1 746 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 EID3Q8N140 333 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 KIF2BQ8N4N8 673 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 RELL2Q8NC24 303 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-214ENST00000572365 LILRB1Q8NHL6 650 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-214ENST00000572365 FNDC8Q8TC99 324 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 FAM222BQ8WU58 562 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 TMEM255BQ8WV15 326 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 GIMAP1Q8WWP7 306 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 FIG4Q92562 907 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 NEUROG1Q92886 237 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 PHF21AQ96BD5 680 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 IMMP1LQ96LU5 166 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 ZNF599Q96NL3 588 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 BIRC8Q96P09 236 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 NAA11Q9BSU3 229 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-214ENST00000572365 CNPY3Q9BT09 278 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 ABHD6Q9BV23 337 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 POLR1EQ9GZS1 481 aaKnown RBP4.76□□□□□ -1.65
SF3B3-214ENST00000572365 OPA3Q9H6K4 179 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 IL26Q9NPH9 171 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 ATAD3AQ9NVI7 634 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 RHBDL2Q9NX52 303 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 ZNF282Q9UDV7 671 aaPredicted RBP4.76□□□□□ -1.65
SF3B3-214ENST00000572365 ZMAT5Q9UDW3 170 aaKnown RBP4.76□□□□□ -1.65
SF3B3-214ENST00000572365 MTRF1LQ9UGC7 380 aaKnown RBP4.76□□□□□ -1.65
SF3B3-214ENST00000572365 BCAP29Q9UHQ4 241 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 RWDD2AQ9UIY3 292 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 DLGAP4Q9Y2H0 992 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 STK38LQ9Y2H1 464 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 FAM215AQ9Y5M1 114 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 LIPGQ9Y5X9 500 aa4.76□□□□□ -1.65
SF3B3-214ENST00000572365 A0A0B4J293 547 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 A0A0G2JPF8 293 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 A0A0J9YY10 115 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 FEZF1A0PJY2 475 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 PINLYPA6NC86 204 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 KRT87PA6NCN2 255 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 C15orf62A8K5M9 175 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 BTNL10A8MVZ5 291 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 GPR89AB7ZAQ6 455 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 HNRNPCL3B7ZW38 293 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 GOLGA8MH3BSY2 632 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 ZNF701M0R085 212 aaPredicted RBP4.75□□□□□ -1.65
SF3B3-214ENST00000572365 PSMA7O14818 248 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 PRPSAP2O60256 369 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 GPRIN2O60269 458 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 CTSVO60911 334 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 WDR1O75083 606 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 CIB2O75838 187 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 GYPCP04921 128 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 LYNP07948 512 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 ALOX5P09917 674 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 GPR89BP0CG08 455 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 HNRNPCL4P0DMR1 293 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 MSH3P20585 1137 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 HMOX2P30519 316 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 HSD17B3P37058 310 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 CDKN2AP42771 156 aaKnown RBP4.75□□□□□ -1.65
SF3B3-214ENST00000572365 KLK7P49862 253 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 BLVRAP53004 296 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 DSCR9P59020 149 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 MAGOHP61326 146 aaKnown RBP4.75□□□□□ -1.65
SF3B3-214ENST00000572365 ISL1P61371 349 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 PLIN5Q00G26 463 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 SNTA1Q13424 505 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 GTF2H2Q13888 395 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 CAPRIN1Q14444 709 aaKnown RBP4.75□□□□□ -1.65
SF3B3-214ENST00000572365 SF3B4Q15427 424 aaKnown RBP eCLIP4.75□□□□□ -1.654e-8■■■■■ 27.2
SF3B3-214ENST00000572365 HYAL4Q2M3T9 481 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 RNASEH2BQ5TBB1 312 aaKnown RBP4.75□□□□□ -1.65
SF3B3-214ENST00000572365 GTF2H2CQ6P1K8 395 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 DNAJC24Q6P3W2 148 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 PLXDC2Q6UX71 529 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 LRRC74BQ6ZQY2 392 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 PLEKHM3Q6ZWE6 761 aa4.75□□□□□ -1.65
SF3B3-214ENST00000572365 CYP4V2Q6ZWL3 525 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms