RNA–Protein interactions for RNA: ENST00000571613.5

RPAIN-210, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,688 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-210ENST00000571613 TGM1P22735 817 aa17.7■□□□□ 0.42
RPAIN-210ENST00000571613 MST1P26927 711 aa17.7■□□□□ 0.42
RPAIN-210ENST00000571613 NOS3P29474 1203 aa17.7■□□□□ 0.42
RPAIN-210ENST00000571613 HTR1FP30939 366 aa17.7■□□□□ 0.42
RPAIN-210ENST00000571613 MAP2K6P52564 334 aa17.7■□□□□ 0.42
RPAIN-210ENST00000571613 CDH11P55287 796 aa17.7■□□□□ 0.42
RPAIN-210ENST00000571613 ZNF74Q16587 644 aa17.7■□□□□ 0.42
RPAIN-210ENST00000571613 COL28A1Q2UY09 1125 aa17.7■□□□□ 0.42
RPAIN-210ENST00000571613 CXXC5Q7LFL8 322 aaKnown RBP17.7■□□□□ 0.42
RPAIN-210ENST00000571613 SLC46A3Q7Z3Q1 461 aa17.7■□□□□ 0.42
RPAIN-210ENST00000571613 ARMC10Q8N2F6 343 aa17.7■□□□□ 0.42
RPAIN-210ENST00000571613 NLGN4YQ8NFZ3 816 aaPredicted RBP17.7■□□□□ 0.42
RPAIN-210ENST00000571613 FGF20Q9NP95 211 aaPredicted RBP17.7■□□□□ 0.42
RPAIN-210ENST00000571613 NANSQ9NR45 359 aa17.7■□□□□ 0.42
RPAIN-210ENST00000571613 IL20RAQ9UHF4 553 aa17.7■□□□□ 0.42
RPAIN-210ENST00000571613 KLHL21Q9UJP4 597 aa17.7■□□□□ 0.42
RPAIN-210ENST00000571613 DIMT1Q9UNQ2 313 aaKnown RBP17.7■□□□□ 0.42
RPAIN-210ENST00000571613 GPR52Q9Y2T5 361 aa17.7■□□□□ 0.42
RPAIN-210ENST00000571613 ADORA3P0DMS8 318 aa17.69■□□□□ 0.42
RPAIN-210ENST00000571613 PAICSP22234 425 aaKnown RBP17.69■□□□□ 0.42
RPAIN-210ENST00000571613 GAS1P54826 345 aa17.69■□□□□ 0.42
RPAIN-210ENST00000571613 DLX5P56178 289 aa17.69■□□□□ 0.42
RPAIN-210ENST00000571613 C3orf38Q5JPI3 329 aa17.69■□□□□ 0.42
RPAIN-210ENST00000571613 THSD4Q6ZMP0 1018 aa17.69■□□□□ 0.42
RPAIN-210ENST00000571613 PRSS33Q8NF86 280 aa17.69■□□□□ 0.42
RPAIN-210ENST00000571613 STK35Q8TDR2 534 aa17.69■□□□□ 0.42
RPAIN-210ENST00000571613 FUNDC2Q9BWH2 189 aa17.69■□□□□ 0.42
RPAIN-210ENST00000571613 FKRPQ9H9S5 495 aa17.69■□□□□ 0.42
RPAIN-210ENST00000571613 GPN2Q9H9Y4 310 aaPredicted RBP17.69■□□□□ 0.42
RPAIN-210ENST00000571613 CPNE5Q9HCH3 593 aa17.69■□□□□ 0.42
RPAIN-210ENST00000571613 ZNF229Q9UJW7 825 aa17.69■□□□□ 0.42
RPAIN-210ENST00000571613 SLC6A5Q9Y345 797 aa17.69■□□□□ 0.42
RPAIN-210ENST00000571613 TRAV36DV7A0A075B6V5 113 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 ADAM10O14672 748 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 ARPC3O15145 178 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 DKK1O94907 266 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 MT-ATP6P00846 226 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 HIST1H2ABP04908 130 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 MYL12AP19105 171 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 NBL1P41271 181 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 RPS4XP62701 263 aaKnown RBP17.68■□□□□ 0.42
RPAIN-210ENST00000571613 DNASE1L3Q13609 305 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 TIGD6Q17RP2 521 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 ZNF791Q3KP31 576 aaPredicted RBP17.68■□□□□ 0.42
RPAIN-210ENST00000571613 HIST3H2AQ7L7L0 130 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 PPP1R32Q7Z5V6 425 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 C10orf53Q8N6V4 93 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 PROKR2Q8NFJ6 384 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 HIST1H2ACQ93077 130 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 RNFT2Q96EX2 444 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 GPX7Q96SL4 187 aaPredicted RBP17.68■□□□□ 0.42
RPAIN-210ENST00000571613 MYCBPQ99417 103 aaPredicted RBP17.68■□□□□ 0.42
RPAIN-210ENST00000571613 PHOX2BQ99453 314 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 MND1Q9BWT6 205 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 ZNF160Q9HCG1 818 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 PPP4R1LQ9P1A2 415 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 ENPP5Q9UJA9 477 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 HIF3AQ9Y2N7 669 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 MYO15AQ9UKN7 3530 aa17.68■□□□□ 0.42
RPAIN-210ENST00000571613 A8MVM7 634 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 PRR23D1E9PI22 279 aaPredicted RBP17.67■□□□□ 0.42
RPAIN-210ENST00000571613 H3BMQ9 156 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 LCKP06239 509 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 PRR23D2P0DMB1 279 aaPredicted RBP17.67■□□□□ 0.42
RPAIN-210ENST00000571613 APEHP13798 732 aaKnown RBP17.67■□□□□ 0.42
RPAIN-210ENST00000571613 CCNA2P20248 432 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 OTX2P32243 289 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 APOBEC1P41238 236 aaKnown RBP17.67■□□□□ 0.42
RPAIN-210ENST00000571613 SSR4P51571 173 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 FHL1Q13642 323 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 C1DQ13901 141 aaKnown RBP17.67■□□□□ 0.42
RPAIN-210ENST00000571613 BCDIN3DQ7Z5W3 292 aaKnown RBP17.67■□□□□ 0.42
RPAIN-210ENST00000571613 RPS19BP1Q86WX3 136 aaKnown RBP17.67■□□□□ 0.42
RPAIN-210ENST00000571613 CPOQ8IVL8 374 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 OR10G3Q8NGC4 313 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 ASB15Q8WXK1 588 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 YIPF6Q96EC8 236 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 COG8Q96MW5 612 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 ENKD1Q9H0I2 346 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 HINT3Q9NQE9 182 aaKnown RBP17.67■□□□□ 0.42
RPAIN-210ENST00000571613 EXOSC1Q9Y3B2 195 aaKnown RBP17.67■□□□□ 0.42
RPAIN-210ENST00000571613 WIF1Q9Y5W5 379 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 TMED7-TICAM2A0A0A6YYA0 188 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 TRIM64BA6NI03 449 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 SLC22A31A6NKX4 558 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 OR2T1O43869 369 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 RPL4P36578 427 aaKnown RBP17.67■□□□□ 0.42
RPAIN-210ENST00000571613 MLLT10P55197 1068 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 CLDN6P56747 220 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 EGR4Q05215 589 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 CHAF1BQ13112 559 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 TOMM34Q15785 309 aaPredicted RBP17.67■□□□□ 0.42
RPAIN-210ENST00000571613 P2RY8Q86VZ1 359 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 OR52I1Q8NGK6 324 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 OR6S1Q8NH40 331 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 LGALS12Q96DT0 336 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 ERMAPQ96PL5 475 aaPredicted RBP17.67■□□□□ 0.42
RPAIN-210ENST00000571613 FOXJ2Q9P0K8 574 aa17.67■□□□□ 0.42
RPAIN-210ENST00000571613 TMED7Q9Y3B3 224 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms