RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 KLK11Q9UBX7 282 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 ACOD1A6NK06 481 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 A8MUA0 341 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 GPR89AB7ZAQ6 455 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 ADAM11O75078 769 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 GPR89BP0CG08 455 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 RPS4Y1P22090 263 aaKnown RBP16.09■□□□□ 0.17
SCARF1-205ENST00000571272 CCR9P51686 369 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 RAG2P55895 527 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 SGCGQ13326 291 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 DYRK1AQ13627 763 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 TMEM65Q6PI78 240 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 CDH24Q86UP0 819 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 OR2T4Q8NH00 348 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 SPPL3Q8TCT6 385 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 C7orf50Q9BRJ6 194 aaKnown RBP16.09■□□□□ 0.17
SCARF1-205ENST00000571272 SEC22CQ9BRL7 303 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 C1QTNF6Q9BXI9 259 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 NOX4Q9NPH5 578 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 DAPP1Q9UN19 280 aa16.09■□□□□ 0.17
SCARF1-205ENST00000571272 C19orf53Q9UNZ5 99 aaPredicted RBP16.09■□□□□ 0.17
SCARF1-205ENST00000571272 PCDHGA9Q9Y5G4 932 aaKnown RBP16.09■□□□□ 0.17
SCARF1-205ENST00000571272 IDSB3KWA1 339 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 OGG1O15527 345 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 HNRNPA1P09651 372 aaKnown RBP eCLIP16.08■□□□□ 0.16
SCARF1-205ENST00000571272 UCHL1P09936 223 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 TLX1P31314 330 aaPredicted RBP16.08■□□□□ 0.16
SCARF1-205ENST00000571272 ARHGEF6Q15052 776 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 PRSS41Q7RTY9 318 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 ZNRF4Q8WWF5 429 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 SMARCD2Q92925 531 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 ZNF559Q9BR84 538 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 MCCC2Q9HCC0 563 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 POT1Q9NUX5 634 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 HAO2Q9NYQ3 351 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 A0A1B0GWA3 101 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 ARPC1BO15143 372 aaKnown RBP16.08■□□□□ 0.16
SCARF1-205ENST00000571272 AK4P27144 223 aaPredicted RBP16.08■□□□□ 0.16
SCARF1-205ENST00000571272 MFSD13AQ14CX5 517 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 SLC25A25Q6KCM7 469 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 RD3Q7Z3Z2 195 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 CMIPQ8IY22 773 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 NRIP3Q9NQ35 241 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 THAP10Q9P2Z0 257 aaPredicted RBP16.08■□□□□ 0.16
SCARF1-205ENST00000571272 TBC1D29Q9UFV1 150 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 ADAM18Q9Y3Q7 739 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 MAB21L2Q9Y586 359 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 RNF215Q9Y6U7 377 aa16.08■□□□□ 0.16
SCARF1-205ENST00000571272 MUC22E2RYF6 1773 aaPredicted RBP16.07■□□□□ 0.16
SCARF1-205ENST00000571272 PTPRSQ13332 1948 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 B3GALT2O43825 422 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 FGF17O60258 216 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 CTSVO60911 334 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 IFNGP01579 166 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 ALDOBP05062 364 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 PSMB1P20618 241 aaKnown RBP16.07■□□□□ 0.16
SCARF1-205ENST00000571272 RPS15AP62244 130 aaKnown RBP16.07■□□□□ 0.16
SCARF1-205ENST00000571272 GXYLT1Q4G148 440 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 TCTE1Q5JU00 501 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 UBE2NLQ5JXB2 153 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 USP53Q70EK8 1073 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 FCRLAQ7L513 359 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 TMEM52Q8NDY8 209 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 MRPS2Q9Y399 296 aaKnown RBP16.07■□□□□ 0.16
SCARF1-205ENST00000571272 DENND4AQ7Z401 1863 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 KNL1Q8NG31 2342 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 GSTZ1O43708 216 aaPredicted RBP16.07■□□□□ 0.16
SCARF1-205ENST00000571272 TIMP1P01033 207 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 POLR2CP19387 275 aaPredicted RBP16.07■□□□□ 0.16
SCARF1-205ENST00000571272 SRMP19623 302 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 GRPRP30550 384 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 SLC6A6P31641 620 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 RAD52P43351 418 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 FHL5Q5TD97 284 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 APOOLQ6UXV4 268 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 SLITRK4Q8IW52 837 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 CNN2Q99439 309 aaKnown RBP16.07■□□□□ 0.16
SCARF1-205ENST00000571272 ZCCHC4Q9H5U6 513 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 FGF22Q9HCT0 170 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 RDH8Q9NYR8 311 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 DPP7Q9UHL4 492 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 COPS3Q9UNS2 423 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 SLC17A4Q9Y2C5 497 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 IER3IP1Q9Y5U9 82 aa16.07■□□□□ 0.16
SCARF1-205ENST00000571272 A0A087WV48 116 aa16.06■□□□□ 0.16
SCARF1-205ENST00000571272 A0A1W2PPL8 197 aa16.06■□□□□ 0.16
SCARF1-205ENST00000571272 OR5K3A6NET4 321 aa16.06■□□□□ 0.16
SCARF1-205ENST00000571272 KHNYNO15037 678 aaKnown RBP16.06■□□□□ 0.16
SCARF1-205ENST00000571272 PIN1P1O15428 100 aa16.06■□□□□ 0.16
SCARF1-205ENST00000571272 SLC31A1O15431 190 aa16.06■□□□□ 0.16
SCARF1-205ENST00000571272 SELENOFO60613 162 aa16.06■□□□□ 0.16
SCARF1-205ENST00000571272 SERPINI2O75830 405 aa16.06■□□□□ 0.16
SCARF1-205ENST00000571272 ATP1B1P05026 303 aa16.06■□□□□ 0.16
SCARF1-205ENST00000571272 CT62P0C5K7 136 aa16.06■□□□□ 0.16
SCARF1-205ENST00000571272 RRASP10301 218 aa16.06■□□□□ 0.16
SCARF1-205ENST00000571272 FHL1Q13642 323 aa16.06■□□□□ 0.16
SCARF1-205ENST00000571272 PDGFRLQ15198 375 aa16.06■□□□□ 0.16
SCARF1-205ENST00000571272 FAM199XQ6PEV8 388 aaPredicted RBP16.06■□□□□ 0.16
SCARF1-205ENST00000571272 SLC35F2Q8IXU6 374 aa16.06■□□□□ 0.16
SCARF1-205ENST00000571272 SAMD14Q8IZD0 417 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms