RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 RNF14Q9UBS8 474 aa2.83□□□□□ -1.96
CNOT1-221ENST00000569924 MRTO4Q9UKD2 239 aaKnown RBP2.83□□□□□ -1.96
CNOT1-221ENST00000569924 PSME2Q9UL46 239 aa2.83□□□□□ -1.96
CNOT1-221ENST00000569924 SLC7A7Q9UM01 511 aa2.83□□□□□ -1.96
CNOT1-221ENST00000569924 DLGAP4Q9Y2H0 992 aa2.83□□□□□ -1.96
CNOT1-221ENST00000569924 PPIL1Q9Y3C6 166 aa2.83□□□□□ -1.96
CNOT1-221ENST00000569924 OR10H1Q9Y4A9 318 aa2.83□□□□□ -1.96
CNOT1-221ENST00000569924 HS3ST3B1Q9Y662 390 aa2.83□□□□□ -1.96
CNOT1-221ENST00000569924 PRRC2CQ9Y520 2896 aaKnown RBP2.83□□□□□ -1.96
CNOT1-221ENST00000569924 FBN2P35556 2912 aa2.83□□□□□ -1.96
CNOT1-221ENST00000569924 ESPL1Q14674 2120 aa2.83□□□□□ -1.96
CNOT1-221ENST00000569924 JMJD1CQ15652 2540 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 A0A087X1B8 175 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 IGLV5-52A0A0A0MRZ9 124 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 TRBV5-5A0A0J9YX44 114 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 NCF1BA6NI72 391 aaPredicted RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 OR5K4A6NMS3 321 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 A8MU76 341 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 NCF1CA8MVU1 366 aaPredicted RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 A8MX80 341 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 INAFM1C9JVW0 142 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PPIAL4DF5H284 164 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 OVOL3O00110 214 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 DFFAO00273 331 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PES1O00541 588 aaKnown RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 POLR1CO15160 346 aaPredicted RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 EPHB6O15197 1021 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 INPP4BO15327 924 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 BCAS1O75363 584 aaPredicted RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PRKRAO75569 313 aaKnown RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 EML2O95834 649 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 SOD1P00441 154 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 SERPINA3P01011 423 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 MT-ND2P03891 347 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 FGF4P08620 206 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 KRT7P08729 469 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 CCDC172P0C7W6 258 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PRKAR1AP10644 381 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 FGF5P12034 268 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 EZRP15311 586 aaKnown RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF44P15621 663 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF30P17039 623 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 HOXA5P20719 270 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 CA4P22748 312 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PSMA2P25787 234 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PCK1P35558 622 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 GPR1P46091 355 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 NPY2RP49146 381 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PTH2RP49190 550 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 STC1P52823 247 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 CDH6P55285 790 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PROK1P58294 105 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 RPL26P61254 145 aaKnown RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 RPL23AP62750 156 aaKnown RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 UBE2IP63279 158 aaKnown RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 OGDHQ02218 1023 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 MFGE8Q08431 387 aaPredicted RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 SLC10A7Q0GE19 358 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 TRAF2Q12933 501 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 NFATC2Q13469 925 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF235Q14590 738 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 MEF2DQ14814 521 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 HERC3Q15034 1050 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 SYCP1Q15431 976 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 OR1C1Q15619 314 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 CAMK4Q16566 473 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 EXOC3L2Q2M3D2 409 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 KRTAP19-4Q3LI73 84 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 ODF3L2Q3SX64 289 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PHYHD1Q5SRE7 291 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 ARMC12Q5T9G4 340 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 FHL5Q5TD97 284 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PRAMEF20Q5VT98 475 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 LYPLAL1Q5VWZ2 237 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 TTC23Q5W5X9 447 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 IGFL4Q6B9Z1 124 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 RTL6Q6ICC9 239 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 CAPRIN2Q6IMN6 1127 aaKnown RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 CAPN13Q6MZZ7 669 aaPredicted RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 SLC18B1Q6NT16 456 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 DCUN1D2Q6PH85 259 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 DOK6Q6PKX4 331 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 TMEM64Q6YI46 380 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 ZNF788Q6ZQV5 615 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 KMT5CQ86Y97 462 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 KRTAP19-1Q8IUB9 90 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 LRRC49Q8IUZ0 686 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 APLFQ8IW19 511 aaPredicted RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 MCOLN2Q8IZK6 566 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 CLIP4Q8N3C7 705 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 ARFGAP1Q8N6T3 406 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 NPWQ8N729 165 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 NIPA2Q8N8Q9 360 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 FAM98AQ8NCA5 519 aaKnown RBP2.82□□□□□ -1.96
CNOT1-221ENST00000569924 OR52K1Q8NGK4 314 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 SLC37A2Q8TED4 501 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 PIH1D2Q8WWB5 315 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 DPF1Q92782 380 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 RASD2Q96D21 266 aa2.82□□□□□ -1.96
CNOT1-221ENST00000569924 COQ8BQ96D53 544 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms