RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 TMEM181Q9P2C4 612 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 PRDM4Q9UKN5 801 aa11.58□□□□□ -0.56
CNOT1-220ENST00000569916 RAI1Q7Z5J4 1906 aaPredicted RBP11.58□□□□□ -0.56
CNOT1-220ENST00000569916 IGKV3D-15A0A087WSY6 115 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 ZNF716A6NP11 495 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 ZNF724A8MTY0 619 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 ZNF814B7Z6K7 855 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 FBP2O00757 339 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 CASKO14936 926 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 FRS3O43559 492 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 RAMP1O60894 148 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 GCM2O75603 506 aaPredicted RBP11.57□□□□□ -0.56
CNOT1-220ENST00000569916 THBDP07204 575 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 VIMP08670 466 aaKnown RBP11.57□□□□□ -0.56
CNOT1-220ENST00000569916 PSMB1P20618 241 aaKnown RBP11.57□□□□□ -0.56
CNOT1-220ENST00000569916 EDNRAP25101 427 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 MAP2K6P52564 334 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 MTPNP58546 118 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 COPZ1P61923 177 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 H3F3AP84243 136 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 NFYCQ13952 458 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 SCARB2Q14108 478 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 PDK3Q15120 406 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 TESK1Q15569 626 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 DHRS4L2Q6PKH6 230 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 COMTD1Q86VU5 262 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 PTOV1Q86YD1 416 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 SLC35B4Q969S0 331 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 C3orf49Q96BT1 292 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 ZC3HAV1LQ96H79 300 aaKnown RBP11.57□□□□□ -0.56
CNOT1-220ENST00000569916 PLEKHF2Q9H8W4 249 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 FANCFQ9NPI8 374 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 ZNF226Q9NYT6 803 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 C6orf203Q9P0P8 240 aaPredicted RBP11.57□□□□□ -0.56
CNOT1-220ENST00000569916 ST6GALNAC2Q9UJ37 374 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 TRAPPC4Q9Y296 219 aa11.57□□□□□ -0.56
CNOT1-220ENST00000569916 TPST1O60507 370 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 PPP3CBP16298 524 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 SLC6A2P23975 617 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 CXCR1P25024 350 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 OR3A2P47893 321 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 IST1P53990 364 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 PCBP3P57721 371 aaKnown RBP11.56□□□□□ -0.56
CNOT1-220ENST00000569916 OR2B6P58173 313 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 HOXC5Q00444 222 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 CAPRIN1Q14444 709 aaKnown RBP11.56□□□□□ -0.56
CNOT1-220ENST00000569916 TRMT5Q32P41 509 aaKnown RBP11.56□□□□□ -0.56
CNOT1-220ENST00000569916 PAMR1Q6UXH9 720 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 NET1Q7Z628 596 aaPredicted RBP11.56□□□□□ -0.56
CNOT1-220ENST00000569916 ATG4DQ86TL0 474 aaPredicted RBP11.56□□□□□ -0.56
CNOT1-220ENST00000569916 CXorf67Q86X51 503 aaPredicted RBP11.56□□□□□ -0.56
CNOT1-220ENST00000569916 KRT73Q86Y46 540 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 CCDC103Q8IW40 242 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 HIPK4Q8NE63 616 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 PIGXQ8TBF5 258 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 NINJ1Q92982 152 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 ZNF775Q96BV0 537 aaPredicted RBP11.56□□□□□ -0.56
CNOT1-220ENST00000569916 SPATA5L1Q9BVQ7 753 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 ACTR6Q9GZN1 396 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 OR10A4Q9H209 315 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 SAR1AQ9NR31 198 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 MRGBPQ9NV56 204 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 PRSS50Q9UI38 385 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 ANGPT4Q9Y264 503 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 GPR52Q9Y2T5 361 aa11.56□□□□□ -0.56
CNOT1-220ENST00000569916 CCDC168Q8NDH2 2452 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 SPG11Q96JI7 2443 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 TMEM229AB2RXF0 380 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 FXYD1O00168 92 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 ATP8B1O43520 1251 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 FPR1P21462 350 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 HTR2AP28223 471 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 LOXP28300 417 aaPredicted RBP11.55□□□□□ -0.56
CNOT1-220ENST00000569916 AQP1P29972 269 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 IDUAP35475 653 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 MDH1P40925 334 aaKnown RBP11.55□□□□□ -0.56
CNOT1-220ENST00000569916 SLC16A1P53985 500 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 SLC35A1P78382 337 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 RBBP4Q09028 425 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 BNIP2Q12982 314 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 KLF10Q13118 480 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 TSC22D1Q15714 1073 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 CYP51A1Q16850 503 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 GLIPR1L2Q4G1C9 344 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 Q6ZT83 130 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.55□□□□□ -0.56
CNOT1-220ENST00000569916 GALNT5Q7Z7M9 940 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 C11orf65Q8NCR3 313 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 C10orf82Q8WW14 230 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 ZNF317Q96PQ6 595 aaPredicted RBP11.55□□□□□ -0.56
CNOT1-220ENST00000569916 ZNF607Q96SK3 696 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 POTEKPQ9BYX7 375 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 KAT8Q9H7Z6 458 aaKnown RBP11.55□□□□□ -0.56
CNOT1-220ENST00000569916 EMC3Q9P0I2 261 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 KLHL14Q9P2G3 628 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 PLEKHA6Q9Y2H5 1048 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 ABCA4P78363 2273 aa11.55□□□□□ -0.56
CNOT1-220ENST00000569916 LIPT2A6NK58 231 aa11.54□□□□□ -0.56
CNOT1-220ENST00000569916 A8MVM7 634 aa11.54□□□□□ -0.56
CNOT1-220ENST00000569916 GPR171O14626 319 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms