RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 DNPH1O43598 174 aa12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 CYTIPO60759 359 aa12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 SEC24CP53992 1094 aa12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 DAZAP2Q15038 168 aaPredicted RBP12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 BEND4Q6ZU67 534 aa12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 NET1Q7Z628 596 aaPredicted RBP12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 STK32CQ86UX6 486 aa12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 SNX32Q86XE0 403 aa12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 OR8J3Q8NGG0 315 aa12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 RP9Q8TA86 221 aaKnown RBP12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 DACH2Q96NX9 599 aa12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 ELAC2Q9BQ52 826 aaKnown RBP12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 PSD2Q9BQI7 771 aa12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 RSPO3Q9BXY4 272 aaPredicted RBP12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 POTEKPQ9BYX7 375 aa12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 EVA1AQ9H8M9 152 aa12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 BCO1Q9HAY6 547 aa12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 GID8Q9NWU2 228 aa12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 ARMCX1Q9P291 453 aa12.31□□□□□ -0.44
HERPUD1-218ENST00000569569 FAM221AA4D161 298 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 C16orf97H3BN30 126 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 M0QX08 132 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 DYNC1I1O14576 645 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 FRS3O43559 492 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 TPST1O60507 370 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 MFN2O95140 757 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 FESP07332 822 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 AQP1P29972 269 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 GZMMP51124 257 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 PCBP3P57721 371 aaKnown RBP12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 OR2B6P58173 313 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 KRTAP10-9P60411 292 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 SLC35A1P78382 337 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 SPATA21Q7Z572 469 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 TMEM200AQ86VY9 491 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 ARMC8Q8IUR7 673 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 C3orf49Q96BT1 292 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 DNAJA3Q96EY1 480 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 ECSITQ9BQ95 431 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 NSRP1Q9H0G5 558 aaKnown RBP12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 C12orf49Q9H741 205 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 KLHL28Q9NXS3 571 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 ING1Q9UK53 422 aaPredicted RBP12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 SLC13A4Q9UKG4 626 aa12.3□□□□□ -0.44
HERPUD1-218ENST00000569569 PDZD2O15018 2839 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 ZC3H12DA2A288 527 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 SH3D21A4FU49 640 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 GMNCA6NCL1 334 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 A6NNC1 897 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 ZNF724A8MTY0 619 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 A8MVM7 634 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 FXYD1O00168 92 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 EIF1BO60739 113 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 CTAG2O75638 210 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 GOSR1O95249 250 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 IMPDH2P12268 514 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 KLK2P20151 261 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 LSP1P33241 339 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 PCGF2P35227 344 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 UGT2B10P36537 528 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 H3F3AP84243 136 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 HOXC5Q00444 222 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 DMTNQ08495 405 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 PDK3Q15120 406 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 EXOC3L2Q2M3D2 409 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 VMACQ2NL98 169 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 GLIPR1L2Q4G1C9 344 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 RABL3Q5HYI8 236 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 INTS11Q5TA45 600 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 NUFIP2Q7Z417 695 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 CPLX4Q7Z7G2 160 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 PATL1Q86TB9 770 aaKnown RBP12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 LSMEM1Q8N8F7 131 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 PIGXQ8TBF5 258 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 NAA11Q9BSU3 229 aaPredicted RBP12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 TRIM2Q9C040 744 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 C12orf10Q9HB07 376 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 RASSF1Q9NS23 344 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 RPS6KB2Q9UBS0 482 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 POLQO75417 2590 aa12.29□□□□□ -0.44
HERPUD1-218ENST00000569569 CASKO14936 926 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 GCM2O75603 506 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 C8BP07358 591 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 FPR1P21462 350 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 IDUAP35475 653 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 GYS2P54840 703 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 RGS8P57771 180 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 BNIP2Q12982 314 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 ABLIM2Q6H8Q1 611 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 ATG4DQ86TL0 474 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 COMTD1Q86VU5 262 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 CALHM3Q86XJ0 350 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 POU5F2Q8N7G0 328 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 SMYD1Q8NB12 490 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 OR52E4Q8NGH9 312 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 STK35Q8TDR2 534 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 SLC26A7Q8TE54 656 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 DNAJA4Q8WW22 397 aaPredicted RBP12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 RCN3Q96D15 328 aa12.28□□□□□ -0.44
HERPUD1-218ENST00000569569 WFIKKN1Q96NZ8 548 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms