RNA–Protein interactions for RNA: ENST00000569406.5

CLK3-226, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 3,591 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-226ENST00000569406 NDUFB11Q9NX14 153 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 SLC35A3Q9Y2D2 325 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 SLC27A6Q9Y2P4 619 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 ZNF705GA8MUZ8 300 aaPredicted RBP10.05□□□□□ -0.8
CLK3-226ENST00000569406 OR10H3O60404 316 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 FABP3P05413 133 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 AKT1P31749 480 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 GLP1RP43220 463 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 RPS25P62851 125 aaKnown RBP10.05□□□□□ -0.8
CLK3-226ENST00000569406 RIPPLY2Q5TAB7 128 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 MOB3CQ70IA8 216 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 LAPTM4BQ86VI4 370 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 OR4L1Q8NH43 312 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 GNPDA2Q8TDQ7 276 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 SLC39A7Q92504 469 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 SCLYQ96I15 445 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 ZNF75AQ96N20 296 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 FEVQ99581 238 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 GPR21Q99679 349 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 DPY30Q9C005 99 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 C20orf85Q9H1P6 137 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 MAGIXQ9H6Y5 334 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 AIG1Q9NVV5 245 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 ABT1Q9ULW3 272 aaKnown RBP10.05□□□□□ -0.8
CLK3-226ENST00000569406 NEUROG3Q9Y4Z2 214 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 CHST10O43529 356 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 RGS14O43566 566 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 ABLIM3O94929 683 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 AQP1P29972 269 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 GSK3AP49840 483 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 VLDLRP98155 873 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 ISXQ2M1V0 245 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 PRAMEF14Q5SWL7 426 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 NSUN5P2Q63ZY6 315 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 NCR3LG1Q68D85 454 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 FBXO42Q6P3S6 717 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 SLC36A4Q6YBV0 504 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 CERS6Q6ZMG9 384 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 SZRD1Q7Z422 152 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 NRROSQ86YC3 692 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 GPSM1Q86YR5 675 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 GLB1L2Q8IW92 636 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 OR52N2Q8NGI0 321 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 NUBPLQ8TB37 319 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 THRSPQ92748 146 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 ZNF382Q96SR6 550 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 ATF6BQ99941 703 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 ZDHHC5Q9C0B5 715 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 MAGEH1Q9H213 219 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 POPDC3Q9HBV1 291 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 ISYNA1Q9NPH2 558 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 TMEM184BQ9Y519 407 aaPredicted RBP10.05□□□□□ -0.8
CLK3-226ENST00000569406 PIKFYVEQ9Y2I7 2098 aa10.05□□□□□ -0.8
CLK3-226ENST00000569406 ANKRD61A6NGH8 418 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 HCRTR2O43614 444 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 UCHL1P09936 223 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 BMP7P18075 431 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 ACKR3P25106 362 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 MNX1P50219 401 aaPredicted RBP10.04□□□□□ -0.8
CLK3-226ENST00000569406 DHODHQ02127 395 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.04□□□□□ -0.8
CLK3-226ENST00000569406 C1QTNF3Q9BXJ4 246 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 KLF16Q9BXK1 252 aaPredicted RBP10.04□□□□□ -0.8
CLK3-226ENST00000569406 GFYI3L273 518 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 ARPC1BO15143 372 aaKnown RBP10.04□□□□□ -0.8
CLK3-226ENST00000569406 AK1P00568 194 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 CXCL10P02778 98 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 RPS10P46783 165 aaKnown RBP10.04□□□□□ -0.8
CLK3-226ENST00000569406 PPIAP62937 165 aaKnown RBP10.04□□□□□ -0.8
CLK3-226ENST00000569406 GAGE1Q13065 139 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 GLT8D1Q68CQ7 371 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 VRK3Q8IV63 474 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 DENND6BQ8NEG7 585 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 OR4K2Q8NGD2 314 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 OR56A4Q8NGH8 313 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 PROKR1Q8TCW9 393 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 RNFT2Q96EX2 444 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 INPP5KQ9BT40 448 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 TMED9Q9BVK6 235 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 ELOVL1Q9BW60 279 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 TPT1P8Q9HAU6 139 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 NOX3Q9HBY0 568 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 CBLN4Q9NTU7 201 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 UQCC1Q9NVA1 299 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 TRPC4Q9UBN4 977 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 LHX3Q9UBR4 397 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 INSIG1O15503 277 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 ZNF821O75541 412 aaPredicted RBP10.04□□□□□ -0.8
CLK3-226ENST00000569406 CPSF4O95639 269 aaKnown RBP10.04□□□□□ -0.8
CLK3-226ENST00000569406 UBBP0CG47 229 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 RAD52P43351 418 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 RPS27AP62979 156 aaKnown RBP10.04□□□□□ -0.8
CLK3-226ENST00000569406 UBA52P62987 128 aaKnown RBP10.04□□□□□ -0.8
CLK3-226ENST00000569406 SF1Q15637 639 aaKnown RBP10.04□□□□□ -0.8
CLK3-226ENST00000569406 ELAVL1Q15717 326 aaKnown RBP10.04□□□□□ -0.8
CLK3-226ENST00000569406 BATFQ16520 125 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 CDKN3Q16667 212 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 AKR1C8PQ5T2L2 129 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 OR2A2Q6IF42 318 aa10.04□□□□□ -0.8
CLK3-226ENST00000569406 NPAS4Q8IUM7 802 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms