RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 SLC38A4Q969I6 547 aa14.45□□□□□ -0.1
USB1-215ENST00000569252 UTP4Q969X6 686 aaKnown RBP14.45□□□□□ -0.1
USB1-215ENST00000569252 C3orf49Q96BT1 292 aa14.45□□□□□ -0.1
USB1-215ENST00000569252 HS6ST2Q96MM7 605 aa14.45□□□□□ -0.1
USB1-215ENST00000569252 EPYCQ99645 322 aa14.45□□□□□ -0.1
USB1-215ENST00000569252 KLHDC3Q9BQ90 382 aa14.45□□□□□ -0.1
USB1-215ENST00000569252 CHID1Q9BWS9 393 aa14.45□□□□□ -0.1
USB1-215ENST00000569252 TMEM185BQ9H7F4 350 aa14.45□□□□□ -0.1
USB1-215ENST00000569252 PAQR5Q9NXK6 330 aaPredicted RBP14.45□□□□□ -0.1
USB1-215ENST00000569252 SLC7A7Q9UM01 511 aa14.45□□□□□ -0.1
USB1-215ENST00000569252 POLEQ07864 2286 aa14.45□□□□□ -0.1
USB1-215ENST00000569252 APCP25054 2843 aa14.45□□□□□ -0.1
USB1-215ENST00000569252 TCRBV3S1A0A5B6 114 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 AHRRA9YTQ3 701 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 H0Y3Z8 333 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 EIF1AYO14602 144 aaKnown RBP14.44□□□□□ -0.1
USB1-215ENST00000569252 OPN1LWP04000 364 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 GABRA1P14867 456 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 CPN1P15169 458 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 ERFP50548 548 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 CARD18P57730 90 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 GXYLT1Q4G148 440 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 ZNF585AQ6P3V2 769 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 C5orf46Q6UWT4 87 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 PIWIL3Q7Z3Z3 882 aaKnown RBP14.44□□□□□ -0.1
USB1-215ENST00000569252 GDF7Q7Z4P5 450 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 ATG4DQ86TL0 474 aaPredicted RBP14.44□□□□□ -0.1
USB1-215ENST00000569252 CDK20Q8IZL9 346 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 PIK3C3Q8NEB9 887 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 C7orf34Q96L11 122 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 OR5B2Q96R09 309 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 PIP5K1AQ99755 562 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 NDUFAF4Q9P032 175 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 SPRR3Q9UBC9 169 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 TMCC3Q9ULS5 477 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 SLC5A6Q9Y289 635 aa14.44□□□□□ -0.1
USB1-215ENST00000569252 C2CD3Q4AC94 2353 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 A0A087WUJ7 227 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 TMEM72A0PK05 275 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 FIGNL2A6NMB9 653 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 J3KTA2 159 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 KRT36O76013 467 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 SYNGR4O95473 234 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 H1F0P07305 194 aaKnown RBP14.43□□□□□ -0.1
USB1-215ENST00000569252 HOXD4P09016 255 aaPredicted RBP14.43□□□□□ -0.1
USB1-215ENST00000569252 GTF2E2P29084 291 aaKnown RBP14.43□□□□□ -0.1
USB1-215ENST00000569252 EIF1AXP47813 144 aaKnown RBP14.43□□□□□ -0.1
USB1-215ENST00000569252 LHX2P50458 406 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 ACTR3P61158 418 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 CSNK2A1P68400 391 aaPredicted RBP14.43□□□□□ -0.1
USB1-215ENST00000569252 VLDLRP98155 873 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 SPIBQ01892 262 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 CRYZQ08257 329 aaKnown RBP14.43□□□□□ -0.1
USB1-215ENST00000569252 KPNB1Q14974 876 aaKnown RBP14.43□□□□□ -0.1
USB1-215ENST00000569252 SYT14P1Q58G82 188 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 HBMQ6B0K9 141 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 PPP4R4Q6NUP7 873 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 ADGRG5Q8IZF4 528 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 C10orf53Q8N6V4 93 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 OR5M9Q8NGP3 310 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 FAM57AQ8TBR7 257 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 STK35Q8TDR2 534 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 STMN2Q93045 179 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 ZHX1-C8orf76Q96EF9 292 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 WDYHV1Q96HA8 205 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 KLHL15Q96M94 604 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 NPAS1Q99742 590 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 TAPBPLQ9BX59 468 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 POTEKPQ9BYX7 375 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 PRRG4Q9BZD6 226 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 NMNAT1Q9HAN9 279 aaPredicted RBP14.43□□□□□ -0.1
USB1-215ENST00000569252 KRCC1Q9NPI7 259 aaPredicted RBP14.43□□□□□ -0.1
USB1-215ENST00000569252 CCM2LQ9NUG4 571 aaPredicted RBP14.43□□□□□ -0.1
USB1-215ENST00000569252 RHCGQ9UBD6 479 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 TNFRSF10DQ9UBN6 386 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 A4GNTQ9UNA3 340 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 HDGFL3Q9Y3E1 203 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 AP4S1Q9Y587 144 aa14.43□□□□□ -0.1
USB1-215ENST00000569252 AKAP9Q99996 3911 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 SULT2B1O00204 365 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 ADAMDEC1O15204 470 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 HNRNPRO43390 633 aaKnown RBP14.42□□□□□ -0.1
USB1-215ENST00000569252 OR2T1O43869 369 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 SLC19A2O60779 497 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 WDR1O75083 606 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 WISP2O76076 250 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 DIRAS1O95057 198 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 GADD45GO95257 159 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 AHSA1O95433 338 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 CST1P01037 141 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 SEMG1P04279 462 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 PTGER4P35408 488 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 RBM34P42696 430 aaKnown RBP14.42□□□□□ -0.1
USB1-215ENST00000569252 ARHGDIAP52565 204 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 CCNIQ14094 377 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 ZFP1Q6P2D0 407 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 ZNF730Q6ZMV8 503 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 OFCC1Q8IZS5 231 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 OR2V1Q8NHB1 315 aa14.42□□□□□ -0.1
USB1-215ENST00000569252 PHF10Q8WUB8 498 aaKnown RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms