RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 CFL1P23528 166 aaKnown RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 ELAVL4P26378 380 aaKnown RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 EPHA2P29317 976 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 PRKAR1BP31321 381 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 MPIP34949 423 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 TRIM23P36406 574 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 SSR2P43308 183 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 OR1E2P47887 323 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 PCYT1AP49585 367 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 RORCP51449 518 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 MLLT10P55197 1068 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 TAS2R38P59533 333 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 CSNK1G2P78368 415 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 SRSF4Q08170 494 aaKnown RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 ST3GAL3Q11203 375 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 RAB40BQ12829 278 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 ENPP2Q13822 863 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 SEC23BQ15437 767 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 SPHARQ15513 63 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 MED22Q15528 200 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 CEBPEQ15744 281 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 C3orf38Q5JPI3 329 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 ATAD3BQ5T9A4 648 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 PIP5KL1Q5T9C9 394 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 MFSD4BQ5TF39 518 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 OR4C11Q6IEV9 310 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 ADNP2Q6IQ32 1131 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 C1orf94Q6P1W5 598 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 KLHL17Q6TDP4 642 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 TSEN54Q7Z6J9 526 aaKnown RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 MMAAQ8IVH4 418 aaKnown RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 SLC43A2Q8N370 569 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 CLDN22Q8N7P3 220 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 ZNF248Q8NDW4 579 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 B3GNT7Q8NFL0 401 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 OR9Q2Q8NGE9 314 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 OR5AR1Q8NGP9 310 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 OR52J3Q8NH60 311 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 WDR36Q8NI36 951 aaKnown RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 TMEM171Q8WVE6 324 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 PMM1Q92871 262 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 KIAA1143Q96AT1 154 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 SLC22A18Q96BI1 424 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 TXNDC15Q96J42 360 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 WDFY2Q96P53 400 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 NIPSNAP1Q9BPW8 284 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 THAP7Q9BT49 309 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 DPCDQ9BVM2 203 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 TAPBPLQ9BX59 468 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 SEMA4CQ9C0C4 833 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 C6orf62Q9GZU0 229 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 RSPH9Q9H1X1 276 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 KIR3DX1Q9H7L2 352 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 SLC25A19Q9HC21 320 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 ZBTB20Q9HC78 741 aaPredicted RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 MOV10Q9HCE1 1003 aaKnown RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 ZDHHC4Q9NPG8 344 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 TM7SF3Q9NS93 570 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 ZCCHC3Q9NUD5 404 aaKnown RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 GPR83Q9NYM4 423 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 OR6C2Q9NZP2 312 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 SCML1Q9UN30 329 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 SNX7Q9UNH6 387 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 DIMT1Q9UNQ2 313 aaKnown RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 TRAPPC4Q9Y296 219 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 SLC17A4Q9Y2C5 497 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 WDR37Q9Y2I8 494 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 TDRKHQ9Y2W6 561 aaKnown RBP4.87□□□□□ -1.63
CAPN3-217ENST00000567817 GRIP1Q9Y3R0 1128 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 KIAA1549LQ6ZVL6 1849 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 C2CD3Q4AC94 2353 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 GON4LQ3T8J9 2241 aa4.87□□□□□ -1.63
CAPN3-217ENST00000567817 OBSL1O75147 1896 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 HYKKA2RU49 373 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 KRT87PA6NCN2 255 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 H3BN98 237 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 SAP18O00422 153 aaKnown RBP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 HMGN4O00479 90 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 PCDH17O14917 1159 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 OR1F1O43749 312 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 KAT7O95251 611 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 RAB36O95755 333 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 AK1P00568 194 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 PTHP01270 115 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 IL1AP01583 271 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 APODP05090 189 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 HMGN1P05114 100 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 PCCBP05166 539 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 TRAPPC2P0DI81 140 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 TRAPPC2BP0DI82 140 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 CSNK2A2P19784 350 aaPredicted RBP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 HIST1H1TP22492 207 aaPredicted RBP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 GADD45AP24522 165 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 PTBP1P26599 531 aaKnown RBP eCLIP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 CMPK1P30085 196 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 PKLRP30613 574 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 TMED10P49755 219 aaKnown RBP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 CLCNKAP51800 687 aa4.86□□□□□ -1.63
CAPN3-217ENST00000567817 NCBP2P52298 156 aaKnown RBP eCLIP4.86□□□□□ -1.63
CAPN3-217ENST00000567817 RPS15AP62244 130 aaKnown RBP4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms