RNA–Protein interactions for RNA: ENST00000567737.1

SMG1-213, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, human

TSL 3

Gene SMG1, Length 721 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMG1-213	ENST00000567737	POU6F2	P78424	691 aa	Predicted RBP	11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	ZNF763	Q0D2J5	394 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	HSPB3	Q12988	150 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	DUSP5	Q16690	384 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	CCDC103	Q8IW40	242 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	OR5W2	Q8NH69	310 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	SLC25A43	Q8WUT9	341 aa	Predicted RBP	11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	YIPF5	Q969M3	257 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	RBM4B	Q9BQ04	359 aa	Known RBP	11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	HOXD1	Q9GZZ0	328 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	TMEM45A	Q9NWC5	275 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	GIN1	Q9NXP7	522 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	CRNN	Q9UBG3	495 aa	Predicted RBP	11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	TES	Q9UGI8	421 aa	Known RBP	11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	MID2	Q9UJV3	735 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	TMCO1	Q9UM00	188 aa		11.83	□□□□□ -0.52
SMG1-213	ENST00000567737	TCRBV9S1A1T	A0A576	114 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	CLDN34	H7C241	214 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	ETV2	O00321	342 aa	Predicted RBP	11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	MANBA	O00462	879 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	DNPH1	O43598	174 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	KLHL2	O95198	593 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	PMS2P2	O95744	297 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	IGLV1-44	P01699	117 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	C2	P06681	752 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	VSIG8	P0DPA2	414 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	MRPS11	P82912	194 aa	Known RBP	11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	KLHL26	Q53HC5	615 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	FAM219B	Q5XKK7	198 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737		Q6ZPA2	131 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	SPATC1	Q76KD6	591 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	ZNF551	Q7Z340	670 aa	Predicted RBP	11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	GSPT2	Q8IYD1	628 aa	Known RBP	11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	ZNF614	Q8N883	585 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	OR1K1	Q8NGR3	316 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	JADE3	Q92613	823 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	MS4A4E	Q96PG1	132 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	CITED1	Q99966	193 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	ACPT	Q9BZG2	426 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	IQCG	Q9H095	443 aa	Known RBP	11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	SEC61A2	Q9H9S3	476 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	OPN4	Q9UHM6	478 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	ZNF232	Q9UNY5	417 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	CMAHP	Q9Y471	501 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	FLVCR1	Q9Y5Y0	555 aa		11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	SPIN1	Q9Y657	262 aa	Predicted RBP	11.82	□□□□□ -0.52
SMG1-213	ENST00000567737	GIMAP1-GIMAP5	A0A087WTJ2	511 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	PPP6C	O00743	305 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	ZNF264	O43296	627 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	SKAP2	O75563	359 aa	Predicted RBP	11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	KRT33A	O76009	404 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	OR4F21	O95013	312 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	GSN	P06396	782 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	TSPAN8	P19075	237 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	TUBA1B	P68363	451 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	TUBA4A	P68366	448 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	MVK	Q03426	396 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	BTK	Q06187	659 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	MERTK	Q12866	999 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	SNTB2	Q13425	540 aa	Known RBP	11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	SLC9A3R2	Q15599	337 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	ARMCX4	Q5H9R4	360 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	TECRL	Q5HYJ1	363 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	OTUD3	Q5T2D3	398 aa	Predicted RBP	11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	CYS1	Q717R9	158 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	TUBA1A	Q71U36	451 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	RPS27L	Q71UM5	84 aa	Known RBP	11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	RHOU	Q7L0Q8	258 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	KIR3DL3	Q8N743	410 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	POMGNT2	Q8NAT1	580 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	ACTRT1	Q8TDG2	376 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	ST8SIA1	Q92185	356 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	DNAJA3	Q96EY1	480 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	GIMAP5	Q96F15	307 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	OTUB1	Q96FW1	271 aa	Predicted RBP	11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	CHMP6	Q96FZ7	201 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	BTBD2	Q9BX70	525 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	BEX1	Q9HBH7	125 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	ZNF69	Q9UC07	566 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	NUP50	Q9UKX7	468 aa		11.81	□□□□□ -0.52
SMG1-213	ENST00000567737	ARPC4-TTLL3	A0A0A6YYG9	625 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	EIF4E2	O60573	245 aa	Known RBP	11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	SMIM24	O75264	130 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	ULK1	O75385	1050 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	DEAF1	O75398	565 aa	Predicted RBP	11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	SEC31A	O94979	1220 aa	Known RBP	11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	UBL4A	P11441	157 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	EVX1	P49640	407 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	CDH13	P55290	713 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	SESN3	P58005	492 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	DAG1	Q14118	895 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	VAX1	Q5SQQ9	334 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	ZNF362	Q5T0B9	420 aa	Predicted RBP	11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	AVPI1	Q5T686	147 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	FAM71E1	Q6IPT2	247 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	ZCCHC12	Q6PEW1	402 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	ZNF662	Q6ZS27	426 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	ADGRG3	Q86Y34	549 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	FAM169B	Q8N8A8	192 aa		11.8	□□□□□ -0.52
SMG1-213	ENST00000567737	TMEM234	Q8WY98	164 aa		11.8	□□□□□ -0.52

Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms