RNA–Protein interactions for RNA: ENST00000567003.1

PALB2-205, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 789 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-205ENST00000567003 IL23RQ5VWK5 629 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 EMBQ6PCB8 327 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 C6orf120Q7Z4R8 191 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 ADGRG3Q86Y34 549 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 FAM71CQ8NEG0 241 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 MOAP1Q96BY2 351 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 COQ8BQ96D53 544 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 TXLNGYQ9BZA5 131 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 ZNF350Q9GZX5 532 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 DCTN4Q9UJW0 460 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 FLVCR1Q9Y5Y0 555 aa13.51□□□□□ -0.25
PALB2-205ENST00000567003 SPIN1Q9Y657 262 aaPredicted RBP13.51□□□□□ -0.25
PALB2-205ENST00000567003 RNF103-CHMP3A0A140T963 221 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 NDUFS8O00217 210 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 AP3D1O14617 1153 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 GPR37O15354 613 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 IMPDH2P12268 514 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 ZNF23P17027 643 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 MAPK1P28482 360 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 APOBEC1P41238 236 aaKnown RBP13.5□□□□□ -0.25
PALB2-205ENST00000567003 MAGEA8P43361 318 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 SNRPD2P62316 118 aaKnown RBP13.5□□□□□ -0.25
PALB2-205ENST00000567003 FUT5Q11128 374 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 PGS1Q32NB8 556 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 ARHGAP11BQ3KRB8 267 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 LIPNQ5VXI9 398 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 TYW3Q6IPR3 259 aaKnown RBP13.5□□□□□ -0.25
PALB2-205ENST00000567003 VHLLQ6RSH7 139 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 C16orf62Q7Z3J2 963 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 SLC46A3Q7Z3Q1 461 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 SPATA19Q7Z5L4 167 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.5□□□□□ -0.25
PALB2-205ENST00000567003 ANP32BQ92688 251 aaKnown RBP13.5□□□□□ -0.25
PALB2-205ENST00000567003 PPP3R2Q96LZ3 170 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 DUSP26Q9BV47 211 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 MECRQ9BV79 373 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 OR51I1Q9H343 314 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 ATAD3AQ9NVI7 634 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 HDGFL3Q9Y3E1 203 aa13.5□□□□□ -0.25
PALB2-205ENST00000567003 MEGF8Q7Z7M0 2845 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 IGHV1-18A0A0C4DH31 117 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 LOC390937A0A1W2PQ73 354 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 TMEM72A0PK05 275 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 ZC3H12DA2A288 527 aaKnown RBP13.49□□□□□ -0.25
PALB2-205ENST00000567003 TRIM13O60858 407 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 OR12D1P0DN82 309 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 PRPS1P60891 318 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 H3F3AP84243 136 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 LGALS3BPQ08380 585 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 SQLEQ14534 574 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 C6orf136Q5SQH8 315 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 OR4F3Q6IEY1 312 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 TNFAIP8L2Q6P589 184 aaPredicted RBP13.49□□□□□ -0.25
PALB2-205ENST00000567003 ZCCHC23Q6ZST2 131 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 GRINAQ7Z429 371 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 RIMKLAQ8IXN7 391 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 C17orf78Q8N4C9 275 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 FNDC5Q8NAU1 212 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 C1orf162Q8NEQ5 155 aaPredicted RBP13.49□□□□□ -0.25
PALB2-205ENST00000567003 EPS8L3Q8TE67 593 aaKnown RBP13.49□□□□□ -0.25
PALB2-205ENST00000567003 RAB8BQ92930 207 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 ZG16BQ96DA0 208 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 BHLHE41Q9C0J9 482 aaPredicted RBP13.49□□□□□ -0.25
PALB2-205ENST00000567003 SEC61A2Q9H9S3 476 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 TMEM181Q9P2C4 612 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 SLC9A8Q9Y2E8 581 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 DYSFO75923 2080 aa13.49□□□□□ -0.25
PALB2-205ENST00000567003 TMED7-TICAM2A0A0A6YYA0 188 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 ANKRD28O15084 1053 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 DNPH1O43598 174 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 TCF21O43680 179 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 LYPLA1O75608 230 aaPredicted RBP13.48□□□□□ -0.25
PALB2-205ENST00000567003 AK1P00568 194 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 C1QCP02747 245 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 FGF4P08620 206 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 KRT4P19013 534 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 MPGP29372 298 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 ALDH3A1P30838 453 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 ARRB2P32121 409 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 SERPINF1P36955 418 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 IDH2P48735 452 aaKnown RBP13.48□□□□□ -0.25
PALB2-205ENST00000567003 TUBA1BP68363 451 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 TUBA4AP68366 448 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 ATP6AP1LQ52LC2 224 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 KLHL24Q6TFL4 600 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 FRRS1Q6ZNA5 592 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 TUBA1AQ71U36 451 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 MNS1Q8NEH6 495 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 CNOT9Q92600 299 aaKnown RBP13.48□□□□□ -0.25
PALB2-205ENST00000567003 ZNF385AQ96PM9 386 aaKnown RBP13.48□□□□□ -0.25
PALB2-205ENST00000567003 PLA2G12AQ9BZM1 189 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 CA10Q9NS85 328 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 SLC35A3Q9Y2D2 325 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 TMED7Q9Y3B3 224 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 WDR45Q9Y484 360 aa13.48□□□□□ -0.25
PALB2-205ENST00000567003 WNT11O96014 354 aa13.47□□□□□ -0.25
PALB2-205ENST00000567003 OR4A8P0C604 315 aa13.47□□□□□ -0.25
PALB2-205ENST00000567003 G6PDP11413 515 aa13.47□□□□□ -0.25
PALB2-205ENST00000567003 HOXB1P14653 301 aaPredicted RBP13.47□□□□□ -0.25
PALB2-205ENST00000567003 SRP14P37108 136 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms