RNA–Protein interactions for RNA: ENST00000566221.5

SPG7-213, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 734 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-213ENST00000566221 ZNF337Q9Y3M9 751 aa13.35□□□□□ -0.27
SPG7-213ENST00000566221 CFAP46Q8IYW2 2715 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 TMEM72A0PK05 275 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 A8MVM7 634 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 CLOCKO15516 846 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 EFNA2O43921 213 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 PEPDP12955 493 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 BMP7P18075 431 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 CCNA2P20248 432 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 IL11P20809 199 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 CLK1P49759 484 aaKnown RBP13.34□□□□□ -0.27
SPG7-213ENST00000566221 VASNQ6EMK4 673 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 TTC33Q6PID6 262 aaPredicted RBP13.34□□□□□ -0.27
SPG7-213ENST00000566221 WDR88Q6ZMY6 472 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 NKAIN4Q8IVV8 208 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 LILRA2Q8N149 483 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 STK35Q8TDR2 534 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 TMEM255BQ8WV15 326 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 SMPDL3BQ92485 455 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 EPYCQ99645 322 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 PKP2Q99959 881 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 OSBPL10Q9BXB5 764 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 SLC19A3Q9BZV2 496 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 TMEM185BQ9H7F4 350 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 SPRR3Q9UBC9 169 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 SAMHD1Q9Y3Z3 626 aaKnown RBP13.34□□□□□ -0.27
SPG7-213ENST00000566221 LYVE1Q9Y5Y7 322 aa13.34□□□□□ -0.27
SPG7-213ENST00000566221 SPENQ96T58 3664 aaKnown RBP13.34□□□□□ -0.27
SPG7-213ENST00000566221 IGKV1D-42A0A075B6H8 117 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 OR14I1A6ND48 311 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 TNFRSF11BO00300 401 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 SFTPDP35247 375 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 LIMS1P48059 325 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 LHX2P50458 406 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 CRYZQ08257 329 aaKnown RBP13.33□□□□□ -0.28
SPG7-213ENST00000566221 BCL2A1Q16548 175 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 ZNF730Q6ZMV8 503 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 ATP6V1C2Q8NEY4 427 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 OR52J3Q8NH60 311 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 CPT1CQ8TCG5 803 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 SLC7A13Q8TCU3 470 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 TMEM239Q8WW34 195 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 ACOT11Q8WXI4 607 aaPredicted RBP13.33□□□□□ -0.28
SPG7-213ENST00000566221 LRTOMTQ8WZ04 291 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 SARAFQ96BY9 339 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 KLHL15Q96M94 604 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 KLHL4Q9C0H6 718 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 VNN3Q9NY84 501 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 TMCC3Q9ULS5 477 aa13.33□□□□□ -0.28
SPG7-213ENST00000566221 TRBV4-1A0A0J9YWV2 114 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 A0A1B0GTH9 108 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 NPIPB7O75200 414 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 E2F6O75461 281 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 AHSA1O95433 338 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 IGF2P01344 180 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 TFPIP10646 304 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 ZNF708P17019 499 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 FUT4P22083 530 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 DNAJA1P31689 397 aaKnown RBP13.32□□□□□ -0.28
SPG7-213ENST00000566221 VHLP40337 213 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 PTDSS1P48651 473 aaKnown RBP13.32□□□□□ -0.28
SPG7-213ENST00000566221 HMGA2P52926 109 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 UGT2B15P54855 530 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 CLDN18P56856 261 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 HSF1Q00613 529 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 EGR4Q05215 589 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 FOXD4Q12950 439 aaPredicted RBP13.32□□□□□ -0.28
SPG7-213ENST00000566221 EXOC3L2Q2M3D2 409 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 DCST1Q5T197 706 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 C1orf140Q5VVS0 124 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 PODNL1Q6PEZ8 512 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 ESPNLQ6ZVH7 1005 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 RRM2BQ7LG56 351 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 GGNQ86UU5 652 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 RNF113BQ8IZP6 322 aaKnown RBP13.32□□□□□ -0.28
SPG7-213ENST00000566221 LINC00471Q8N535 108 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 MEIOBQ8N635 442 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 OR4C15Q8NGM1 316 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 ALPK1Q96QP1 1244 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 FUZQ9BT04 418 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 POTEKPQ9BYX7 375 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 OR11A1Q9GZK7 315 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 VCXQ9H320 206 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 KRCC1Q9NPI7 259 aaPredicted RBP13.32□□□□□ -0.28
SPG7-213ENST00000566221 MED31Q9Y3C7 131 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 HDGFL3Q9Y3E1 203 aa13.32□□□□□ -0.28
SPG7-213ENST00000566221 PHF3Q92576 2039 aaKnown RBP13.31□□□□□ -0.28
SPG7-213ENST00000566221 TRAV36DV7A0A075B6V5 113 aa13.31□□□□□ -0.28
SPG7-213ENST00000566221 A0A087WUU8 490 aa13.31□□□□□ -0.28
SPG7-213ENST00000566221 SH3PXD2BA1X283 911 aa13.31□□□□□ -0.28
SPG7-213ENST00000566221 ZC3H12DA2A288 527 aaKnown RBP13.31□□□□□ -0.28
SPG7-213ENST00000566221 HTR3EA5X5Y0 456 aa13.31□□□□□ -0.28
SPG7-213ENST00000566221 H0YJX3 145 aa13.31□□□□□ -0.28
SPG7-213ENST00000566221 EIF1AYO14602 144 aaKnown RBP13.31□□□□□ -0.28
SPG7-213ENST00000566221 BCKDKO14874 412 aa13.31□□□□□ -0.28
SPG7-213ENST00000566221 SEC14L5O43304 696 aa13.31□□□□□ -0.28
SPG7-213ENST00000566221 WISP2O76076 250 aa13.31□□□□□ -0.28
SPG7-213ENST00000566221 EDN3P14138 238 aa13.31□□□□□ -0.28
SPG7-213ENST00000566221 CPN1P15169 458 aa13.31□□□□□ -0.28
SPG7-213ENST00000566221 PTNP21246 168 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms