RNA–Protein interactions for RNA: ENST00000565550.1

SPSB3-207, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

TSL 2

Gene SPSB3, Length 898 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-207ENST00000565550 RAI1Q7Z5J4 1906 aaPredicted RBP16.82■□□□□ 0.28
SPSB3-207ENST00000565550 AP3D1O14617 1153 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 HS3ST1O14792 307 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 MRASO14807 208 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 ARAFP10398 606 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 GPX2P18283 190 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 ELK4P28324 431 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 PCSK6P29122 969 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 RYKP34925 604 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 CRISP3P54108 245 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 KCNJ10P78508 379 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 QPRTQ15274 297 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 RNPS1Q15287 305 aaKnown RBP16.81■□□□□ 0.28
SPSB3-207ENST00000565550 TSC22D1Q15714 1073 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 ADRM1Q16186 407 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 EIF3MQ7L2H7 374 aaKnown RBP16.81■□□□□ 0.28
SPSB3-207ENST00000565550 ZNF611Q8N823 705 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 ATP6V1C2Q8NEY4 427 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 STEAP2Q8NFT2 490 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 S100PBPQ96BU1 408 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 HDHD5Q9BXW7 423 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 LAT2Q9GZY6 243 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 RAD21L1Q9H4I0 556 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 PIF1Q9H611 641 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 ZNF701Q9NV72 531 aaPredicted RBP16.81■□□□□ 0.28
SPSB3-207ENST00000565550 RLIMQ9NVW2 624 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 CHST2Q9Y4C5 530 aa16.81■□□□□ 0.28
SPSB3-207ENST00000565550 GPC6Q9Y625 555 aaPredicted RBP16.81■□□□□ 0.28
SPSB3-207ENST00000565550 PRR14LQ5THK1 2151 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 GJE1A6NN92 205 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 EIF4E2O60573 245 aaKnown RBP16.8■□□□□ 0.28
SPSB3-207ENST00000565550 GCM2O75603 506 aaPredicted RBP16.8■□□□□ 0.28
SPSB3-207ENST00000565550 PRKD3O94806 890 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 PAX1P15863 534 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 PRKCAP17252 672 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 MAGEA8P43361 318 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 SUMO3P55854 103 aaPredicted RBP16.8■□□□□ 0.28
SPSB3-207ENST00000565550 TRMT5Q32P41 509 aaKnown RBP16.8■□□□□ 0.28
SPSB3-207ENST00000565550 MMEL1Q495T6 779 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 RABL3Q5HYI8 236 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 MRPL2Q5T653 305 aaKnown RBP16.8■□□□□ 0.28
SPSB3-207ENST00000565550 TFAP2EQ6VUC0 442 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 FCRLAQ7L513 359 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 PTOV1Q86YD1 416 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 GABRG1Q8N1C3 465 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 OR52P1PQ8NH57 321 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 OR5W2Q8NH69 310 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 AKAP1Q92667 903 aaKnown RBP eCLIP16.8■□□□□ 0.28
SPSB3-207ENST00000565550 RCN3Q96D15 328 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 NSRP1Q9H0G5 558 aaKnown RBP16.8■□□□□ 0.28
SPSB3-207ENST00000565550 MYLK2Q9H1R3 596 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 CXorf56Q9H5V9 222 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 MTHFD2LQ9H903 347 aaPredicted RBP16.8■□□□□ 0.28
SPSB3-207ENST00000565550 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.8■□□□□ 0.28
SPSB3-207ENST00000565550 KLHL13Q9P2N7 655 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 USP22Q9UPT9 525 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 GMEB1Q9Y692 573 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 USF3Q68DE3 2245 aa16.8■□□□□ 0.28
SPSB3-207ENST00000565550 EVPLLA8MZ36 301 aa16.79■□□□□ 0.28
SPSB3-207ENST00000565550 GKN3PP0CG01 181 aa16.79■□□□□ 0.28
SPSB3-207ENST00000565550 IL7RP16871 459 aa16.79■□□□□ 0.28
SPSB3-207ENST00000565550 PPIBP23284 216 aaKnown RBP16.79■□□□□ 0.28
SPSB3-207ENST00000565550 AQP1P29972 269 aa16.79■□□□□ 0.28
SPSB3-207ENST00000565550 CBFBQ13951 182 aa16.79■□□□□ 0.28
SPSB3-207ENST00000565550 NANOGP8Q6NSW7 305 aa16.79■□□□□ 0.28
SPSB3-207ENST00000565550 COMTD1Q86VU5 262 aa16.79■□□□□ 0.28
SPSB3-207ENST00000565550 TOR1AIP2Q8NFQ8 470 aa16.79■□□□□ 0.28
SPSB3-207ENST00000565550 TACO1Q9BSH4 297 aaKnown RBP16.79■□□□□ 0.28
SPSB3-207ENST00000565550 COQ10BQ9H8M1 238 aa16.79■□□□□ 0.28
SPSB3-207ENST00000565550 NANOGQ9H9S0 305 aa16.79■□□□□ 0.28
SPSB3-207ENST00000565550 ZNF443Q9Y2A4 671 aaPredicted RBP16.79■□□□□ 0.28
SPSB3-207ENST00000565550 DNHD1Q96M86 4753 aa16.79■□□□□ 0.28
SPSB3-207ENST00000565550 NSD1Q96L73 2696 aaPredicted RBP16.78■□□□□ 0.28
SPSB3-207ENST00000565550 CSPG4Q6UVK1 2322 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 IGHV3-15A0A0B4J1V0 119 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 FRS3O43559 492 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 TMCC2O75069 709 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 PGM3O95394 542 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 DBIP07108 87 aaKnown RBP16.78■□□□□ 0.28
SPSB3-207ENST00000565550 YES1P07947 543 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 COX4I1P13073 169 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 ENPP1P22413 925 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 ATP5J2P56134 94 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 CDK6Q00534 326 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 CYLC2Q14093 348 aaPredicted RBP16.78■□□□□ 0.28
SPSB3-207ENST00000565550 SCARB2Q14108 478 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 MAPRE2Q15555 327 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 SFRP5Q5T4F7 317 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 PRIMA1Q86XR5 153 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 PEX5LQ8IYB4 626 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 CLIP4Q8N3C7 705 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 LILRB1Q8NHL6 650 aaPredicted RBP16.78■□□□□ 0.28
SPSB3-207ENST00000565550 LRRC58Q96CX6 371 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 MRGPRX4Q96LA9 322 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 GP6Q9HCN6 339 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 CALML5Q9NZT1 146 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 GMPR2Q9P2T1 348 aaKnown RBP16.78■□□□□ 0.28
SPSB3-207ENST00000565550 LAMP3Q9UQV4 416 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 SLC35A3Q9Y2D2 325 aa16.78■□□□□ 0.28
SPSB3-207ENST00000565550 A0A0G2JPF8 293 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms