RNA–Protein interactions for RNA: ENST00000564841.1

LINC00554-201, long intergenic non-protein coding RNA 554, humanhuman

BASIC

Gene LINC00554, Length 3,011 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00554-201ENST00000564841 J3QRE1 110 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 GSTM3P21266 225 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 GCGRP47871 477 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 SHC2P98077 582 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 TMEM115Q12893 351 aaPredicted RBP15.04■□□□□ -0
LINC00554-201ENST00000564841 ZNF805Q5CZA5 627 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 PLEKHS1Q5SXH7 462 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 ZNF626Q68DY1 528 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 SPICQ8N5J4 248 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 FAM71CQ8NEG0 241 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 OR5T2Q8NGG2 359 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 SFT2D1Q8WV19 159 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 PGLYRP3Q96LB9 341 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 GSN-AS1Q9NRJ2 163 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 NDRG3Q9UGV2 375 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 TINAGQ9UJW2 476 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 FEZF1A0PJY2 475 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 ZNF806P0C7X5 589 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 ADCYAP1P18509 176 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 NOS3P29474 1203 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 HACD4Q5VWC8 232 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 ARL14Q8N4G2 192 aa15.04■□□□□ -0
LINC00554-201ENST00000564841 EIF4E3Q8N5X7 224 aaKnown RBP15.04■□□□□ -0
LINC00554-201ENST00000564841 ZNF433Q8N7K0 673 aaPredicted RBP15.04■□□□□ -0
LINC00554-201ENST00000564841 FAM98AQ8NCA5 519 aaKnown RBP15.04■□□□□ -0
LINC00554-201ENST00000564841 PCYT1BQ9Y5K3 369 aaPredicted RBP15.04■□□□□ -0
LINC00554-201ENST00000564841 MTCL1Q9Y4B5 1905 aaKnown RBP15.04■□□□□ -0
LINC00554-201ENST00000564841 IGLV3-16A0A075B6K0 115 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 CDHR4A6H8M9 788 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 CRYBA1P05813 215 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 SRSF3P84103 164 aaKnown RBP15.03■□□□□ -0
LINC00554-201ENST00000564841 FUT5Q11128 374 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 TP53I3Q53FA7 332 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 PAN3Q58A45 887 aaKnown RBP15.03■□□□□ -0
LINC00554-201ENST00000564841 OR56A3Q8NH54 315 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 C16orf58Q96GQ5 468 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 OR14A2Q96R54 314 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 DEC1Q9P2X7 70 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 A0A087WV48 116 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 A0A1W2PS29 197 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 PRAMEF2O60811 474 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 CATP04040 527 aaKnown RBP15.03■□□□□ -0
LINC00554-201ENST00000564841 THY1P04216 161 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 DDX6P26196 483 aaKnown RBP eCLIP15.03■□□□□ -0
LINC00554-201ENST00000564841 CLDN2P57739 230 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 S100A12P80511 92 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 LASP1Q14847 261 aaKnown RBP15.03■□□□□ -0
LINC00554-201ENST00000564841 PARS2Q7L3T8 475 aaKnown RBP15.03■□□□□ -0
LINC00554-201ENST00000564841 FCRLAQ7L513 359 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 RAB11FIP2Q7L804 512 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 LRRC56Q8IYG6 542 aaPredicted RBP15.03■□□□□ -0
LINC00554-201ENST00000564841 PNPLA2Q96AD5 504 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 PEX11GQ96HA9 241 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 BARX1Q9HBU1 254 aaPredicted RBP15.03■□□□□ -0
LINC00554-201ENST00000564841 BIN3Q9NQY0 253 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 DOCK9Q9BZ29 2069 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 SULT1C2O00338 296 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 PLPP1O14494 284 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 SLC16A5O15375 505 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 SNRPEP62304 92 aaKnown RBP15.03■□□□□ -0
LINC00554-201ENST00000564841 VN1R2Q8NFZ6 395 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 CPEB1Q9BZB8 566 aaKnown RBP15.03■□□□□ -0
LINC00554-201ENST00000564841 CHST6Q9GZX3 395 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 TAS2R5Q9NYW4 299 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 ENTPD4Q9Y227 616 aa15.03■□□□□ -0
LINC00554-201ENST00000564841 A0A0G2JPF8 293 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 MEIS3P1A6NDR6 274 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 HNRNPCL3B7ZW38 293 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 KCNAB3O43448 404 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 ATP1B1P05026 303 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 ZGLP1P0C6A0 271 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 HNRNPCL4P0DMR1 293 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 PSMB5P28074 263 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 ATXN7L3Q14CW9 347 aaPredicted RBP15.02■□□□□ -0
LINC00554-201ENST00000564841 PRAMEF13Q5VWM6 474 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 TANGO2Q6ICL3 276 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 C11orf88Q6PI97 169 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 ZC3H14Q6PJT7 736 aaKnown RBP15.02■□□□□ -0
LINC00554-201ENST00000564841 PXKQ7Z7A4 578 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 OR14A16Q8NHC5 309 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 PDCD1LG2Q9BQ51 273 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 UBQLN3Q9H347 655 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 TMEM231Q9H6L2 316 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 TMEM138Q9NPI0 162 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 EQTNQ9NQ60 294 aa15.02■□□□□ -0
LINC00554-201ENST00000564841 ZCCHC3Q9NUD5 404 aaKnown RBP15.02■□□□□ -0
LINC00554-201ENST00000564841 DHCR7Q9UBM7 475 aaKnown RBP15.02■□□□□ -0
LINC00554-201ENST00000564841 PLXNB3Q9ULL4 1909 aa15.02□□□□□ -0.01
LINC00554-201ENST00000564841 TMEM272A0A1B0GTI8 110 aa15.02□□□□□ -0.01
LINC00554-201ENST00000564841 LINC01565O15544 149 aa15.02□□□□□ -0.01
LINC00554-201ENST00000564841 PRAF2O60831 178 aa15.02□□□□□ -0.01
LINC00554-201ENST00000564841 SLCO2B1O94956 709 aa15.02□□□□□ -0.01
LINC00554-201ENST00000564841 TBX6O95947 436 aaPredicted RBP15.02□□□□□ -0.01
LINC00554-201ENST00000564841 SERPINA3P01011 423 aa15.02□□□□□ -0.01
LINC00554-201ENST00000564841 HNRNPA1P09651 372 aaKnown RBP eCLIP15.02□□□□□ -0.01
LINC00554-201ENST00000564841 TMIGD3P0DMS9 266 aaPredicted RBP15.02□□□□□ -0.01
LINC00554-201ENST00000564841 NFYBP25208 207 aa15.02□□□□□ -0.01
LINC00554-201ENST00000564841 MPGP29372 298 aa15.02□□□□□ -0.01
LINC00554-201ENST00000564841 MAT2AP31153 395 aaKnown RBP15.02□□□□□ -0.01
LINC00554-201ENST00000564841 LRRC37A5PQ49AS3 106 aa15.02□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms