RNA–Protein interactions for RNA: ENST00000563952.1

CMTM4-204, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-204ENST00000563952 ARFIP2P53365 341 aa27.3■■□□□ 1.96
CMTM4-204ENST00000563952 HOXC5Q00444 222 aa27.3■■□□□ 1.96
CMTM4-204ENST00000563952 NFYCQ13952 458 aa27.3■■□□□ 1.96
CMTM4-204ENST00000563952 CGB2Q6NT52 195 aa27.3■■□□□ 1.96
CMTM4-204ENST00000563952 ZC3HAV1Q7Z2W4 902 aaKnown RBP27.3■■□□□ 1.96
CMTM4-204ENST00000563952 KRT73Q86Y46 540 aa27.3■■□□□ 1.96
CMTM4-204ENST00000563952 DPP10Q8N608 796 aa27.3■■□□□ 1.96
CMTM4-204ENST00000563952 TMEM38AQ9H6F2 299 aa27.3■■□□□ 1.96
CMTM4-204ENST00000563952 PLEKHF2Q9H8W4 249 aa27.3■■□□□ 1.96
CMTM4-204ENST00000563952 CCM2LQ9NUG4 571 aaPredicted RBP27.3■■□□□ 1.96
CMTM4-204ENST00000563952 TRAPPC4Q9Y296 219 aa27.3■■□□□ 1.96
CMTM4-204ENST00000563952 GPR52Q9Y2T5 361 aa27.3■■□□□ 1.96
CMTM4-204ENST00000563952 AKAP6Q13023 2319 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 ZNF724A8MTY0 619 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 DEFB108AA8MXU0 73 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 DNPH1O43598 174 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 IMPDH2P12268 514 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 PPP3CBP16298 524 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 SLC6A2P23975 617 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 DNASE1P24855 282 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 MAP2K6P52564 334 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 ART1P52961 327 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 GALNT5Q7Z7M9 940 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 CCDC103Q8IW40 242 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 GABRG1Q8N1C3 465 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 PIGXQ8TBF5 258 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 TSPEARQ8WU66 669 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 NINJ1Q92982 152 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 CGREF1Q99674 301 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 MED4Q9NPJ6 270 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 EMC3Q9P0I2 261 aa27.29■■□□□ 1.96
CMTM4-204ENST00000563952 ABCA4P78363 2273 aa27.28■■□□□ 1.96
CMTM4-204ENST00000563952 A0A1W2PPR1 153 aa27.28■■□□□ 1.96
CMTM4-204ENST00000563952 GCM2O75603 506 aaPredicted RBP27.28■■□□□ 1.96
CMTM4-204ENST00000563952 PSMB1P20618 241 aaKnown RBP27.28■■□□□ 1.96
CMTM4-204ENST00000563952 AQP1P29972 269 aa27.28■■□□□ 1.96
CMTM4-204ENST00000563952 OR3A2P47893 321 aa27.28■■□□□ 1.96
CMTM4-204ENST00000563952 MTPNP58546 118 aa27.28■■□□□ 1.96
CMTM4-204ENST00000563952 SLC35A1P78382 337 aa27.28■■□□□ 1.96
CMTM4-204ENST00000563952 BNIP2Q12982 314 aa27.28■■□□□ 1.96
CMTM4-204ENST00000563952 TSC22D1Q15714 1073 aa27.28■■□□□ 1.96
CMTM4-204ENST00000563952 ADRM1Q16186 407 aa27.28■■□□□ 1.96
CMTM4-204ENST00000563952 PAMR1Q6UXH9 720 aa27.28■■□□□ 1.96
CMTM4-204ENST00000563952 ANKRD27Q96NW4 1050 aa27.28■■□□□ 1.96
CMTM4-204ENST00000563952 SPATA5L1Q9BVQ7 753 aa27.28■■□□□ 1.96
CMTM4-204ENST00000563952 PRSS50Q9UI38 385 aa27.28■■□□□ 1.96
CMTM4-204ENST00000563952 PRDM4Q9UKN5 801 aa27.28■■□□□ 1.96
CMTM4-204ENST00000563952 FREM1Q5H8C1 2179 aa27.27■■□□□ 1.96
CMTM4-204ENST00000563952 ZNF814B7Z6K7 855 aa27.27■■□□□ 1.96
CMTM4-204ENST00000563952 ADAP00813 363 aa27.27■■□□□ 1.96
CMTM4-204ENST00000563952 THBDP07204 575 aa27.27■■□□□ 1.96
CMTM4-204ENST00000563952 FPR1P21462 350 aa27.27■■□□□ 1.96
CMTM4-204ENST00000563952 PRKAR1BP31321 381 aa27.27■■□□□ 1.96
CMTM4-204ENST00000563952 SELPLGQ14242 412 aa27.27■■□□□ 1.96
CMTM4-204ENST00000563952 TESK1Q15569 626 aa27.27■■□□□ 1.96
CMTM4-204ENST00000563952 CYP51A1Q16850 503 aa27.27■■□□□ 1.96
CMTM4-204ENST00000563952 ZNF100Q8IYN0 542 aa27.27■■□□□ 1.96
CMTM4-204ENST00000563952 IGKV3D-15A0A087WSY6 115 aa27.26■■□□□ 1.95
CMTM4-204ENST00000563952 ZNF716A6NP11 495 aa27.26■■□□□ 1.95
CMTM4-204ENST00000563952 RAMP1O60894 148 aa27.26■■□□□ 1.95
CMTM4-204ENST00000563952 EDNRAP25101 427 aa27.26■■□□□ 1.95
CMTM4-204ENST00000563952 IDUAP35475 653 aa27.26■■□□□ 1.95
CMTM4-204ENST00000563952 CAPRIN1Q14444 709 aaKnown RBP27.26■■□□□ 1.95
CMTM4-204ENST00000563952 PDK3Q15120 406 aa27.26■■□□□ 1.95
CMTM4-204ENST00000563952 ALKBH2Q6NS38 261 aa27.26■■□□□ 1.95
CMTM4-204ENST00000563952 WFDC8Q8IUA0 241 aa27.26■■□□□ 1.95
CMTM4-204ENST00000563952 STEAP2Q8NFT2 490 aa27.26■■□□□ 1.95
CMTM4-204ENST00000563952 S100PBPQ96BU1 408 aa27.26■■□□□ 1.95
CMTM4-204ENST00000563952 ZNF607Q96SK3 696 aa27.26■■□□□ 1.95
CMTM4-204ENST00000563952 NAA11Q9BSU3 229 aaPredicted RBP27.26■■□□□ 1.95
CMTM4-204ENST00000563952 RSPO3Q9BXY4 272 aaPredicted RBP27.26■■□□□ 1.95
CMTM4-204ENST00000563952 ANGPT4Q9Y264 503 aa27.26■■□□□ 1.95
CMTM4-204ENST00000563952 NOSIPQ9Y314 301 aaKnown RBP27.26■■□□□ 1.95
CMTM4-204ENST00000563952 IL32P24001 234 aa27.25■■□□□ 1.95
CMTM4-204ENST00000563952 CEACAM7Q14002 265 aa27.25■■□□□ 1.95
CMTM4-204ENST00000563952 SFRP5Q5T4F7 317 aa27.25■■□□□ 1.95
CMTM4-204ENST00000563952 DHRS4L2Q6PKH6 230 aa27.25■■□□□ 1.95
CMTM4-204ENST00000563952 HIPK4Q8NE63 616 aa27.25■■□□□ 1.95
CMTM4-204ENST00000563952 SLC35B4Q969S0 331 aa27.25■■□□□ 1.95
CMTM4-204ENST00000563952 C3orf49Q96BT1 292 aa27.25■■□□□ 1.95
CMTM4-204ENST00000563952 HDHD5Q9BXW7 423 aa27.25■■□□□ 1.95
CMTM4-204ENST00000563952 POTEKPQ9BYX7 375 aa27.25■■□□□ 1.95
CMTM4-204ENST00000563952 AKAP9Q99996 3911 aa27.25■■□□□ 1.95
CMTM4-204ENST00000563952 FBP2O00757 339 aa27.24■■□□□ 1.95
CMTM4-204ENST00000563952 TPST1O60507 370 aa27.24■■□□□ 1.95
CMTM4-204ENST00000563952 EIF1BO60739 113 aaKnown RBP27.24■■□□□ 1.95
CMTM4-204ENST00000563952 RAF1P04049 648 aa27.24■■□□□ 1.95
CMTM4-204ENST00000563952 KEAP1Q14145 624 aa27.24■■□□□ 1.95
CMTM4-204ENST00000563952 OR7A5Q15622 319 aa27.24■■□□□ 1.95
CMTM4-204ENST00000563952 Q6ZT83 130 aa27.24■■□□□ 1.95
CMTM4-204ENST00000563952 COMTD1Q86VU5 262 aa27.24■■□□□ 1.95
CMTM4-204ENST00000563952 PTOV1Q86YD1 416 aa27.24■■□□□ 1.95
CMTM4-204ENST00000563952 C11orf65Q8NCR3 313 aa27.24■■□□□ 1.95
CMTM4-204ENST00000563952 KISS1RQ969F8 398 aaPredicted RBP27.24■■□□□ 1.95
CMTM4-204ENST00000563952 OR10A4Q9H209 315 aa27.24■■□□□ 1.95
CMTM4-204ENST00000563952 CCDC134Q9H6E4 229 aa27.24■■□□□ 1.95
CMTM4-204ENST00000563952 RPS6KB2Q9UBS0 482 aa27.24■■□□□ 1.95
CMTM4-204ENST00000563952 A8MVM7 634 aa27.23■■□□□ 1.95
CMTM4-204ENST00000563952 GPR171O14626 319 aa27.23■■□□□ 1.95
CMTM4-204ENST00000563952 GPIP06744 558 aa27.23■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms