RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 LSMEM1Q8N8F7 131 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 GPR32P1Q8NGA4 272 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 OR10Q1Q8NGQ4 319 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 OR2V1Q8NHB1 315 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF563Q8TA94 476 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 CA5BP1Q8WTZ4 195 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 SLC25A43Q8WUT9 341 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-204ENST00000563130 SMPDL3BQ92485 455 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 TAMM41Q96BW9 452 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 WFDC6Q9BQY6 131 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 CTPS2Q9NRF8 586 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 JKAMPQ9P055 326 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 CHRNA9Q9UGM1 479 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 USP22Q9UPT9 525 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 AP3M1Q9Y2T2 418 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 ADGRG4Q8IZF6 3080 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 DOCK7Q96N67 2140 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 A6NHS1 94 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 CCT8L1PA6NM43 557 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 FAM220BPB1ANY3 271 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 SYT5O00445 386 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 TNFSF11O14788 317 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF208O43345 1280 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 FRS3O43559 492 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 CXCL13O43927 109 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 TNFSF13O75888 250 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 LGI1O95970 557 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 CRHP06850 196 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 C8BP07358 591 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 GP1BBP13224 206 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 UQCRBP14927 111 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 IGFBP2P18065 325 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 CD247P20963 164 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 CTSSP25774 331 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 TACR3P29371 465 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 SFTPDP35247 375 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 CLK1P49759 484 aaKnown RBP5.54□□□□□ -1.52
CNOT1-204ENST00000563130 NUDT2P50583 147 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 RAC3P60763 192 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 SGCBQ16585 318 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 SLC25A35Q3KQZ1 300 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 FBXL19-AS1Q494R0 122 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 HBMQ6B0K9 141 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 WBP2NLQ6ICG8 309 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 OR2A2Q6IF42 318 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 CHMP1BQ7LBR1 199 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 RELL2Q8NC24 303 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-204ENST00000563130 OR2T12Q8NG77 320 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 OSTF1Q92882 214 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 CPNE4Q96A23 557 aaPredicted RBP5.54□□□□□ -1.52
CNOT1-204ENST00000563130 C3orf49Q96BT1 292 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 SRXN1Q9BYN0 137 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 UCK2Q9BZX2 261 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 EVA1AQ9H8M9 152 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 CACYBPQ9HB71 228 aaKnown RBP5.54□□□□□ -1.52
CNOT1-204ENST00000563130 SERINC1Q9NRX5 453 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 ARL8BQ9NVJ2 186 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 HECTD1Q9ULT8 2610 aa5.54□□□□□ -1.52
CNOT1-204ENST00000563130 FLNBO75369 2602 aaKnown RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 CACNA1CQ13936 2221 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 TMED7-TICAM2A0A0A6YYA0 188 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 C19orf84I3L1E1 186 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 DVL2O14641 736 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 NPIPB7O75200 414 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 OPN1SWP03999 348 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 TMIGD3P0DMS9 266 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 FCGR2AP12318 317 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 BMP5P22003 454 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 HTR2AP28223 471 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 HTR1EP28566 365 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 OPRM1P35372 400 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 KIR2DL2P43627 348 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 POLR2HP52434 150 aaKnown RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 SLC7A2P52569 658 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 CARD18P57730 90 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 HOXC5Q00444 222 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 KRT72Q14CN4 511 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 ZNF239Q16600 458 aaKnown RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 NRF1Q16656 503 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 PDSS1Q5T2R2 415 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 C6orf89Q6UWU4 347 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 TMPPEQ6ZT21 453 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 ATG4DQ86TL0 474 aaPredicted RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 MED12LQ86YW9 2145 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 GCNT2Q8N0V5 402 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 SMYD1Q8NB12 490 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 CCDC197Q8NCU1 140 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 RNF128Q8TEB7 428 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 RASSF5Q8WWW0 418 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 INTS12Q96CB8 462 aaKnown RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 ARL5BQ96KC2 179 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 ARHGDIGQ99819 225 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 SFXN3Q9BWM7 321 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 ENKD1Q9H0I2 346 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 C12orf10Q9HB07 376 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 CHST11Q9NPF2 352 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 KCNJ16Q9NPI9 418 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 TMEM181Q9P2C4 612 aa5.53□□□□□ -1.52
CNOT1-204ENST00000563130 TESQ9UGI8 421 aaKnown RBP5.53□□□□□ -1.52
CNOT1-204ENST00000563130 TAGLN3Q9UI15 199 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms