RNA–Protein interactions for RNA: ENST00000562914.1

HERPUD1-205, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-205ENST00000562914 ABHD12BQ7Z5M8 362 aaPredicted RBP13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 RIMKLAQ8IXN7 391 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 RFLNBQ8N5W9 214 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 FNDC5Q8NAU1 212 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 OR5AK3PQ8NH89 298 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 DDIT4LQ96D03 193 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 ARL5BQ96KC2 179 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 PRR14Q9BWN1 585 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 PIF1Q9H611 641 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 PRDM4Q9UKN5 801 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 WDR45Q9Y484 360 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 FLVCR1Q9Y5Y0 555 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 ANK2Q01484 3957 aa13.78□□□□□ -0.2
HERPUD1-205ENST00000562914 ZNF208O43345 1280 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 ZNF23P17027 643 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 NTF4P34130 210 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 OR2B6P58173 313 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 MST1LQ2TV78 715 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 IL23RQ5VWK5 629 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 ADGRG3Q86Y34 549 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 POMGNT2Q8NAT1 580 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 OR52E4Q8NGH9 312 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 TMEM45BQ96B21 275 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 FBXO17Q96EF6 278 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 SLC35G5Q96KT7 338 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 ZNF317Q96PQ6 595 aaPredicted RBP13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 KCNS3Q9BQ31 491 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 C1QTNF6Q9BXI9 259 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 SAP130Q9H0E3 1048 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 SLC7A10Q9NS82 523 aa13.77□□□□□ -0.21
HERPUD1-205ENST00000562914 SLC35F4A4IF30 521 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 TMEM233B4DJY2 109 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 B9A039 149 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 ATP6V1G2-DDX39BF2Z307 99 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 RNASET2O00584 256 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 TGFAP01135 160 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 CHRNGP07510 517 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 SERPINF1P36955 418 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 FOXG1P55316 489 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 RPS26P62854 115 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 SLC17A1Q14916 467 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 SMU1Q2TAY7 513 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 IQCCQ4KMZ1 466 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 EMBQ6PCB8 327 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 PAQR6Q6TCH4 344 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 UGT2A3Q6UWM9 527 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 CCDC103Q8IW40 242 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 CMIPQ8IY22 773 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 ARFGAP2Q8N6H7 521 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 KRTCAP2Q8N6L1 136 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 SORCS2Q96PQ0 1159 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 C1orf50Q9BV19 199 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 KATNB1Q9BVA0 655 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 SF3B5Q9BWJ5 86 aaKnown RBP13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 SERHL2Q9H4I8 314 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 MKS1Q9NXB0 559 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 MOKQ9UQ07 419 aa13.76□□□□□ -0.21
HERPUD1-205ENST00000562914 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.76□□□□□ -0.215e-7■■■□□ 19
HERPUD1-205ENST00000562914 CENPVL1A0A0U1RR11 272 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 RNF103-CHMP3A0A140T963 221 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 TCF21O43680 179 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 LY6HO94772 140 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 CRYAAP02489 173 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 ERCC1P07992 297 aaPredicted RBP13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 FAM153BP0C7A2 387 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 UQCRBP14927 111 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 RYKP34925 604 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 POLR2HP52434 150 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 CLDN8P56748 225 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 KCNJ10P78508 379 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 EFNB3Q15768 340 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 MAPK14Q16539 360 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 C3orf36Q3SXR2 165 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 TSPO2Q5TGU0 170 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 TYW3Q6IPR3 259 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 SLC46A3Q7Z3Q1 461 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 EIF1ADQ8N9N8 165 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 HPS1Q92902 700 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 ZIM3Q96PE6 472 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 OR51I1Q9H343 314 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 C12orf65Q9H3J6 166 aaKnown RBP13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 CA10Q9NS85 328 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 ASIC5Q9NY37 505 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 SVEP1Q4LDE5 3571 aa13.75□□□□□ -0.21
HERPUD1-205ENST00000562914 IGHV4-61A0A0C4DH41 118 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 OR6C65A6NJZ3 312 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 VSTM5A8MXK1 200 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 FAAHO00519 579 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 SLU7O95391 586 aaKnown RBP13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 PCMT1P22061 227 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 PPOXP50336 477 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 HPCAP84074 193 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 SLC25A3Q00325 362 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 CR1LQ2VPA4 569 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 PGS1Q32NB8 556 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 C9orf135Q5VTT2 229 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 IL17RELQ6ZVW7 336 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 C4orf33Q8N1A6 199 aa13.74□□□□□ -0.21
HERPUD1-205ENST00000562914 VPS37AQ8NEZ2 397 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms