RNA–Protein interactions for RNA: ENST00000561978.1

PCAT1-202, prostate cancer associated transcript 1, humanhuman

TSL 1 (best) BASIC

Gene PCAT1, Length 1,992 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT1-202ENST00000561978 ULK3Q6PHR2 472 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 WDR74Q6RFH5 385 aaPredicted RBP10.66□□□□□ -0.7
PCAT1-202ENST00000561978 TMPRSS11AQ6ZMR5 421 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 WDR88Q6ZMY6 472 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 MED25Q71SY5 747 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 MEPCEQ7L2J0 689 aaKnown RBP10.66□□□□□ -0.7
PCAT1-202ENST00000561978 CPOQ8IVL8 374 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 ZNF440Q8IYI8 595 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 OR52N1Q8NH53 320 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 PFN4Q8NHR9 129 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 GATAD2BQ8WXI9 593 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 MVB12AQ96EY5 273 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 CCDC74BQ96LY2 380 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 KCTD7Q96MP8 289 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 MED18Q9BUE0 208 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 HOXD1Q9GZZ0 328 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 SP140LQ9H930 580 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 ENAMQ9NRM1 1142 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 TXNL4BQ9NX01 149 aaKnown RBP10.66□□□□□ -0.7
PCAT1-202ENST00000561978 DNAJB12Q9NXW2 375 aaKnown RBP10.66□□□□□ -0.7
PCAT1-202ENST00000561978 TNFRSF10DQ9UBN6 386 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 OR10H1Q9Y4A9 318 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 MMACHCQ9Y4U1 282 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 SEC16AO15027 2179 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 IGHV5-51A0A0C4DH38 117 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 A0A1B0GWA3 101 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 A0A1W2PNU3 283 aaPredicted RBP10.66□□□□□ -0.7
PCAT1-202ENST00000561978 EFCAB7A8K855 629 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 BHLHE40O14503 412 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 CDC123O75794 336 aaPredicted RBP10.66□□□□□ -0.7
PCAT1-202ENST00000561978 ZGLP1P0C6A0 271 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 TBXA2RP21731 343 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 ACAA2P42765 397 aaKnown RBP10.66□□□□□ -0.7
PCAT1-202ENST00000561978 ARL4DP49703 201 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 SEPHS1P49903 392 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 GPR143P51810 404 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 BTG2P78543 158 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 MAT1AQ00266 395 aaKnown RBP10.66□□□□□ -0.7
PCAT1-202ENST00000561978 IFITM3Q01628 133 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 ZFP36L1Q07352 338 aaKnown RBP10.66□□□□□ -0.7
PCAT1-202ENST00000561978 DOC2BQ14184 412 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.66□□□□□ -0.7
PCAT1-202ENST00000561978 ANKRD39Q53RE8 183 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 ALG10BQ5I7T1 473 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 RTL4Q6ZR62 310 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 ZAR1Q86SH2 424 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 CCDC190Q86UF4 302 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 PLXDC1Q8IUK5 500 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 PARP16Q8N5Y8 322 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 OR4D9Q8NGE8 314 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 C1GALT1C1Q96EU7 318 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 IFT27Q9BW83 186 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 ATP13A2Q9NQ11 1180 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 CMC2Q9NRP2 79 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 INPP5EQ9NRR6 644 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 C20orf141Q9NUB4 165 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 SIGLEC7Q9Y286 467 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 SLC35A3Q9Y2D2 325 aa10.66□□□□□ -0.7
PCAT1-202ENST00000561978 SLC22A31A6NKX4 558 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 NPIPB9F8W1W9 429 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 TGFBR3LH3BV60 316 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 PTP4A3O75365 173 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 IGKV1D-16P01601 117 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 CT45A8P0DMV1 189 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 CT45A9P0DMV2 189 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 GAAP10253 952 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 FGF9P31371 208 aaPredicted RBP10.65□□□□□ -0.7
PCAT1-202ENST00000561978 PGDP52209 483 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 FOXK2Q01167 660 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 BDH1Q02338 343 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 SQSTM1Q13501 440 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 ERV3-1Q14264 604 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 CT45A2Q5DJT8 189 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 OR2G6Q5TZ20 316 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 OAFQ86UD1 273 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 LHFPL3Q86UP9 236 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 ACBD7Q8N6N7 88 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 OR4N2Q8NGD1 307 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 C16orf52Q8NHV5 167 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 GRHL3Q8TE85 626 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 DNAJA4Q8WW22 397 aaPredicted RBP10.65□□□□□ -0.7
PCAT1-202ENST00000561978 SLC25A46Q96AG3 418 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 OTULINQ96BN8 352 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 OR1F2PQ96R84 312 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 CCNL2Q96S94 520 aaPredicted RBP10.65□□□□□ -0.7
PCAT1-202ENST00000561978 SECISBP2Q96T21 854 aaKnown RBP10.65□□□□□ -0.7
PCAT1-202ENST00000561978 KCNS3Q9BQ31 491 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 SLC30A2Q9BRI3 323 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 ZNF426Q9BUY5 554 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 CCDC32Q9BV29 185 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 SPRTNQ9H040 489 aaPredicted RBP10.65□□□□□ -0.7
PCAT1-202ENST00000561978 HINT3Q9NQE9 182 aaKnown RBP10.65□□□□□ -0.7
PCAT1-202ENST00000561978 ERVK13-1Q9NX77 482 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 IL20RAQ9UHF4 553 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 ERVK-19Q9WJR5 959 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 CAB39Q9Y376 341 aaPredicted RBP10.65□□□□□ -0.7
PCAT1-202ENST00000561978 URB1O60287 2271 aaKnown RBP10.65□□□□□ -0.7
PCAT1-202ENST00000561978 EPG5Q9HCE0 2579 aa10.65□□□□□ -0.7
PCAT1-202ENST00000561978 MN1Q10571 1320 aaPredicted RBP10.65□□□□□ -0.7
PCAT1-202ENST00000561978 IQCMA0A1B0GVH7 501 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms