RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 CAPRIN1Q14444 709 aaKnown RBP15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 P2RY6Q15077 328 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 STK11Q15831 433 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 SEZ6L2Q6UXD5 910 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 CCDC103Q8IW40 242 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 CADM2Q8N3J6 435 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 PIGXQ8TBF5 258 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 PMM1Q92871 262 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 MAL2Q969L2 176 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 PERPQ96FX8 193 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 TMEM204Q9BSN7 226 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 TMEM181Q9P2C4 612 aa15.22■□□□□ 0.03
CDC42BPB-208ENST00000561271 DNPH1O43598 174 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 TGDSO95455 350 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 IMPDH2P12268 514 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 PRG2P13727 222 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 COX5AP20674 150 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 MRPL19P49406 292 aaKnown RBP15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 CLK1P49759 484 aaKnown RBP15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 AQP5P55064 265 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 RNF220Q5VTB9 566 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 P3H2Q8IVL5 708 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 FUNDC1Q8IVP5 155 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 ZNF440Q8IYI8 595 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 DDIT4LQ96D03 193 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 GSX1Q9H4S2 264 aaPredicted RBP15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 SLC25A37Q9NYZ2 338 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 CCDC167Q9P0B6 97 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 NOSIPQ9Y314 301 aaKnown RBP15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 CHST2Q9Y4C5 530 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 RNF115Q9Y4L5 304 aa15.21■□□□□ 0.03
CDC42BPB-208ENST00000561271 CHD3Q12873 2000 aaKnown RBP15.21■□□□□ 0.02
CDC42BPB-208ENST00000561271 ARFGEF3Q5TH69 2177 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 ALPK2Q86TB3 2170 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 A0A096LPI6 279 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 TMEM247A6NEH6 219 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 CLIC1O00299 241 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 HS3ST1O14792 307 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 CLOCKO15516 846 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 ZNF208O43345 1280 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 THBS1P07996 1170 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 FKBP2P26885 142 aaKnown RBP15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 ADSLP30566 484 aaPredicted RBP15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 ACAA2P42765 397 aaKnown RBP15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 SLC16A1P53985 500 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 LARS2Q15031 903 aaKnown RBP15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 PDK3Q15120 406 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 RGNQ15493 299 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 SHEQ5VZ18 495 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 MSRB3Q8IXL7 192 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 LRRC75A-AS1Q8N1F1 130 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 UBE2J2Q8N2K1 259 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 CLIP4Q8N3C7 705 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 GOLGA6L1Q8N7Z2 621 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 AKAP1Q92667 903 aaKnown RBP eCLIP15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 APH1AQ96BI3 265 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 SPDL1Q96EA4 605 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 CCDC28BQ9BUN5 200 aa15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 CACYBPQ9HB71 228 aaKnown RBP15.2■□□□□ 0.02
CDC42BPB-208ENST00000561271 CSPG4Q6UVK1 2322 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 ARHGEF9O43307 516 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 FRS3O43559 492 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 RAD51DO75771 328 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 NTF4P34130 210 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 SLC35A1P78382 337 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 H3F3AP84243 136 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 BSPH1Q075Z2 132 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 BNIP2Q12982 314 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 FADDQ13158 208 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 NCMAPQ5T1S8 102 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 LRIF1Q5T3J3 769 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 BLOC1S3Q6QNY0 202 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 CASP12Q6UXS9 341 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 SERPINA11Q86U17 422 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 C10orf111Q8N326 155 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 KBTBD8Q8NFY9 601 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 IGFBPL1Q8WX77 278 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 HSD17B8Q92506 261 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 NEUROG1Q92886 237 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 THOC1Q96FV9 657 aaKnown RBP15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 ADAM19Q9H013 955 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 RAD21L1Q9H4I0 556 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 ESRP2Q9H6T0 727 aaKnown RBP15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 A4GALTQ9NPC4 353 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 INTS9Q9NV88 658 aaKnown RBP15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 THUMPD1Q9NXG2 353 aaKnown RBP15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 SLAMF8Q9P0V8 285 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 TRAPPC4Q9Y296 219 aa15.19■□□□□ 0.02
CDC42BPB-208ENST00000561271 A0A0G2JPF8 293 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 HMGB1P1B2RPK0 211 aaPredicted RBP15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 HNRNPCL2B2RXH8 293 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 HNRNPCL3B7ZW38 293 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 GPR171O14626 319 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 HNRNPCL1O60812 293 aaKnown RBP15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 CD3EP07766 207 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 HNRNPCL4P0DMR1 293 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 BMP2P12643 396 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 FOSL1P15407 271 aa15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 NCF2P19878 526 aaPredicted RBP15.18■□□□□ 0.02
CDC42BPB-208ENST00000561271 CXCR1P25024 350 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms