RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 TPD52L3Q96J77 140 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 MPP4Q96JB8 637 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 MRGPRX4Q96LA9 322 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 ZNF597Q96LX8 424 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 C5orf34Q96MH7 638 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 GNRHR2Q96P88 292 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 SEPHS2Q99611 448 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 EPYCQ99645 322 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 MCHR1Q99705 422 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 TMEM43Q9BTV4 400 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 OSBPL10Q9BXB5 764 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 HES7Q9BYE0 225 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 DSN1Q9H410 356 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 ZNF703Q9H7S9 590 aaPredicted RBP4.95□□□□□ -1.62
ZEB1-220ENST00000560909 RNPEPL1Q9HAU8 725 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 MED17Q9NVC6 651 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 ANKRD10Q9NXR5 420 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 TUBA8Q9NY65 449 aaPredicted RBP4.95□□□□□ -1.62
ZEB1-220ENST00000560909 VNN3Q9NY84 501 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 KLRF1Q9NZS2 232 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 C6orf203Q9P0P8 240 aaPredicted RBP4.95□□□□□ -1.62
ZEB1-220ENST00000560909 PPP4R1LQ9P1A2 415 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 OSGIN1Q9UJX0 560 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 FBXL2Q9UKC9 423 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 SLC13A4Q9UKG4 626 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 BOKQ9UMX3 212 aaPredicted RBP4.95□□□□□ -1.62
ZEB1-220ENST00000560909 B3GNT3Q9Y2A9 372 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 LYVE1Q9Y5Y7 322 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 HEATR5AQ86XA9 2040 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 CHD6Q8TD26 2715 aa4.95□□□□□ -1.62
ZEB1-220ENST00000560909 IGKV1D-42A0A075B6H8 117 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 A0A1B0GVC2 190 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 SH3PXD2BA1X283 911 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 E9PQ18 207 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 J3KTA2 159 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 EIF1AYO14602 144 aaKnown RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ADAMDEC1O15204 470 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ZNF208O43345 1280 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 KLF4O43474 513 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 CHP2O43745 196 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 CDC40O60508 579 aaKnown RBP eCLIP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 LDLRP01130 860 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 H1F0P07305 194 aaKnown RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 TSPAN19P0C672 248 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 RFPL3SP0C7P2 107 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 PNMTP11086 282 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 SFTPCP11686 197 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ANPEPP15144 967 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ZNF17P17021 662 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 FPR1P21462 350 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 CHMP24386 653 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 FASP25445 335 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 DPP4P27487 766 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ELK4P28324 431 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 APOBEC1P41238 236 aaKnown RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 RBM34P42696 430 aaKnown RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 IDH2P48735 452 aaKnown RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 DNASE1L1P49184 302 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 CLK1P49759 484 aaKnown RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ST13P50502 369 aaKnown RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 CDH12P55289 794 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 GFRA1P56159 465 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 CTBP2P56545 445 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 HOXC5Q00444 222 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 EGR4Q05215 589 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ST3GAL3Q11203 375 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 MERTKQ12866 999 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ZNF169Q14929 603 aaPredicted RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 TRAM2Q15035 370 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 QPRTQ15274 297 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 BCL2A1Q16548 175 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ZNF239Q16600 458 aaKnown RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 PLEKHN1Q494U1 663 aaPredicted RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 NHSL2Q5HYW2 709 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 COLEC12Q5KU26 742 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ENTPD8Q5MY95 495 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 PRAMEF20Q5VT98 475 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 OR5M10Q6IEU7 315 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 SHQ1Q6PI26 577 aaKnown RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ARSKQ6UWY0 536 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 CD300LDQ6UXZ3 194 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 WDR88Q6ZMY6 472 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ASB18Q6ZVZ8 466 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 PLEKHM3Q6ZWE6 761 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 CYP4Z1Q86W10 505 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ADGRG3Q86Y34 549 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 RNF113BQ8IZP6 322 aaKnown RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 LINC00471Q8N535 108 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 TMEM251Q8N6I4 163 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ZNF614Q8N883 585 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 Q8NA96 180 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 GATSQ8NAP1 163 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 LSM14AQ8ND56 463 aaKnown RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 OR4K17Q8NGC6 315 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 OR1J4Q8NGS1 313 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 SLC7A13Q8TCU3 470 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 STK35Q8TDR2 534 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ADAMTS16Q8TE57 1224 aa4.94□□□□□ -1.62
ZEB1-220ENST00000560909 ACOT11Q8WXI4 607 aaPredicted RBP4.94□□□□□ -1.62
ZEB1-220ENST00000560909 TMEM234Q8WY98 164 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms