RNA–Protein interactions for RNA: ENST00000560424.1

SMAD3-215, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-215ENST00000560424 OR2L13Q8N349 312 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 C11orf65Q8NCR3 313 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 KBTBD8Q8NFY9 601 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 OR7G1Q8NGA0 311 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 OR10H5Q8NGA6 315 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 OR56A1Q8NGH5 318 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 LILRB1Q8NHL6 650 aaPredicted RBP8.28□□□□□ -1.08
SMAD3-215ENST00000560424 NEUROG1Q92886 237 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 HGDQ93099 445 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 LCORQ96JN0 433 aaPredicted RBP8.28□□□□□ -1.08
SMAD3-215ENST00000560424 NSMCE2Q96MF7 247 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 RNF145Q96MT1 663 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 MAGIXQ9H6Y5 334 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 C3orf14Q9HBI5 128 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 PLSCR4Q9NRQ2 329 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 DCAF13Q9NV06 445 aaKnown RBP8.28□□□□□ -1.08
SMAD3-215ENST00000560424 CISD1Q9NZ45 108 aaKnown RBP8.28□□□□□ -1.08
SMAD3-215ENST00000560424 EGFL7Q9UHF1 273 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 MRPS18CQ9Y3D5 142 aaKnown RBP8.28□□□□□ -1.08
SMAD3-215ENST00000560424 FREM1Q5H8C1 2179 aa8.28□□□□□ -1.08
SMAD3-215ENST00000560424 DYSFO75923 2080 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 ELOA3DA6NLF2 546 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 WASHC1A8K0Z3 465 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 LINC01387J3KSC0 135 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 CXCR6O00574 342 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 PLOD3O60568 738 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 ERAL1O75616 437 aaKnown RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 REM1O75628 298 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 CSF3P09919 207 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 CT62P0C5K7 136 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 ARAFP10398 606 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 FCGR1AP12314 374 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 CPMP14384 443 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 ANPEPP15144 967 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 ITGA2P17301 1181 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 HK1P19367 917 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 PSMA4P25789 261 aaKnown RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 CHI3L1P36222 383 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 SRP14P37108 136 aaKnown RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 CCT3P49368 545 aaKnown RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 XKP51811 444 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 PCBP3P57721 371 aaKnown RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 MRPS22P82650 360 aaKnown RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 PGGHGQ32M88 737 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 ELOA3BQ3SY89 546 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 PDLIM3Q53GG5 364 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 EXOSC6Q5RKV6 272 aaKnown RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 INTS11Q5TA45 600 aaKnown RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 PRAMEF8Q5VWM4 474 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 PRAMEF7Q5VXH5 474 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 AP1ARQ63HQ0 302 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 DESI1Q6ICB0 168 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 ZCCHC12Q6PEW1 402 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 FKBP9P1Q75LS8 142 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 C6orf120Q7Z4R8 191 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 SPATA24Q86W54 205 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 ADGRG5Q8IZF4 528 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 PQLC1Q8N2U9 271 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 ZNF525Q8N782 197 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 ZNF615Q8N8J6 731 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 ELOA3Q8NG57 546 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 PYDC1Q8WXC3 89 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 PROX1Q92786 737 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 HOXB13Q92826 284 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 S100PBPQ96BU1 408 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 ELP4Q96EB1 424 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 RSRC1Q96IZ7 334 aaKnown RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 CACNG6Q9BXT2 260 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 HDHD5Q9BXW7 423 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 A4GALTQ9NPC4 353 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 GIN1Q9NXP7 522 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 PPP4R1LQ9P1A2 415 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 GMPR2Q9P2T1 348 aaKnown RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 NKX1-2Q9UD57 310 aaPredicted RBP8.27□□□□□ -1.09
SMAD3-215ENST00000560424 CLEC4AQ9UMR7 237 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 B3GALT5Q9Y2C3 310 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 AP4S1Q9Y587 144 aa8.27□□□□□ -1.09
SMAD3-215ENST00000560424 A0A096LNT2 108 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 H0YC42 278 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 GSTA4O15217 222 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 AGR2O95994 175 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 THBS1P07996 1170 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 GUSBP08236 651 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 RAP2AP10114 183 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 EGR1P18146 543 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 PSMB1P20618 241 aaKnown RBP8.26□□□□□ -1.09
SMAD3-215ENST00000560424 EFNA1P20827 205 aaPredicted RBP8.26□□□□□ -1.09
SMAD3-215ENST00000560424 IL12BP29460 328 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 KDELR2P33947 212 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 GPC1P35052 558 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 MAGEA2P43356 314 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 EIF1AXP47813 144 aaKnown RBP8.26□□□□□ -1.09
SMAD3-215ENST00000560424 CDH11P55287 796 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 TPD52P55327 224 aaPredicted RBP8.26□□□□□ -1.09
SMAD3-215ENST00000560424 CLDN15P56746 228 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 DUSP2Q05923 314 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 BSPH1Q075Z2 132 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 MAP4K2Q12851 820 aa8.26□□□□□ -1.09
SMAD3-215ENST00000560424 HSPB3Q12988 150 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms