RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 OR6C76A6NM76 312 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 PPM1BO75688 479 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 FUT1P19526 365 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 SLC6A6P31641 620 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 TMED1Q13445 227 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 FNDC7Q5VTL7 733 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 PAQR6Q6TCH4 344 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 RTL4Q6ZR62 310 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 OVCH1Q7RTY7 1134 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 OAFQ86UD1 273 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 CPOQ8IVL8 374 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 NUDT9Q9BW91 350 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 JAM3Q9BX67 310 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 TGIF2Q9GZN2 237 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 CMC2Q9NRP2 79 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 STUB1Q9UNE7 303 aa16.27■□□□□ 0.19
SNX1-208ENST00000559844 A0A087WUJ7 227 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 METTL15A6NJ78 407 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 UTS2O95399 124 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 SLC2A10O95528 541 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 UBL4AP11441 157 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 CPEP16870 476 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 TCN2P20062 427 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 SOX3P41225 446 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 FOXL2P58012 376 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 CRYZQ08257 329 aaKnown RBP16.26■□□□□ 0.19
SNX1-208ENST00000559844 DTX1Q86Y01 620 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 PRSS58Q8IYP2 241 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 IL22RA1Q8N6P7 574 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 STT3BQ8TCJ2 826 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 CT55Q8WUE5 264 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 NKD1Q969G9 470 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 SLC19A3Q9BZV2 496 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 VN1R1Q9GZP7 353 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 WDR70Q9NW82 654 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 MKL2Q9ULH7 1088 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 ASPMQ8IZT6 3477 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 IGLV3-12A0A075B6K2 115 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 TSPAN19P0C672 248 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 LIPCP11150 499 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 SOX6P35712 828 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 SLC9A3P48764 834 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 PSPHP78330 225 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 FOXK2Q01167 660 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 DOC2BQ14184 412 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 EBPQ15125 230 aaKnown RBP16.26■□□□□ 0.19
SNX1-208ENST00000559844 TGIF1Q15583 401 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 MRPL14Q6P1L8 145 aaKnown RBP16.26■□□□□ 0.19
SNX1-208ENST00000559844 SHISA6Q6ZSJ9 500 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 SLC29A4Q7RTT9 530 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 FNDC8Q8TC99 324 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 ARSGQ96EG1 525 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 SGTBQ96EQ0 304 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 NXF2Q9GZY0 626 aaKnown RBP16.26■□□□□ 0.19
SNX1-208ENST00000559844 SLC26A1Q9H2B4 701 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 CARD8Q9Y2G2 431 aa16.26■□□□□ 0.19
SNX1-208ENST00000559844 TRAV27A0A087WT01 109 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 RIIAD1A6NNX1 92 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 TO15178 435 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 GPX5O75715 221 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 NGFRP08138 427 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 PAICSP22234 425 aaKnown RBP16.25■□□□□ 0.19
SNX1-208ENST00000559844 ATP6V1E1P36543 226 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 SLC1A3P43003 542 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 NDUFAF6Q330K2 333 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 WBP2NLQ6ICG8 309 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 NIPAL3Q6P499 406 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 PLBD1Q6P4A8 553 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 MEPCEQ7L2J0 689 aaKnown RBP16.25■□□□□ 0.19
SNX1-208ENST00000559844 LAPTM4BQ86VI4 370 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 PHC2Q8IXK0 858 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 OR1N1Q8NGS0 311 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 OR51A7Q8NH64 312 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 PHOSPHO1Q8TCT1 267 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 GAL3ST4Q96RP7 486 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 LMF1Q96S06 567 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 SIAEQ9HAT2 523 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 SSR3Q9UNL2 185 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 CORINQ9Y5Q5 1042 aa16.25■□□□□ 0.19
SNX1-208ENST00000559844 MED19A0JLT2 244 aaPredicted RBP16.24■□□□□ 0.19
SNX1-208ENST00000559844 PRR23D1E9PI22 279 aaPredicted RBP16.24■□□□□ 0.19
SNX1-208ENST00000559844 J3QRK9 145 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 GTPBP1O00178 669 aaKnown RBP16.24■□□□□ 0.19
SNX1-208ENST00000559844 IFNGP01579 166 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 IGHA1P01876 353 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 PRR23D2P0DMB1 279 aaPredicted RBP16.24■□□□□ 0.19
SNX1-208ENST00000559844 PNMTP11086 282 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 HK1P19367 917 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 IL12BP29460 328 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 DLSTP36957 453 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 ARHGAP11AQ6P4F7 1023 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 THSD4Q6ZMP0 1018 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 BBS1Q8NFJ9 593 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 ENKD1Q9H0I2 346 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 WDR54Q9H977 334 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 EXOSC4Q9NPD3 245 aaKnown RBP16.24■□□□□ 0.19
SNX1-208ENST00000559844 TNFRSF10DQ9UBN6 386 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 LOC101059948A0A1B0GTJ6 334 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 SLC22A31A6NKX4 558 aa16.24■□□□□ 0.19
SNX1-208ENST00000559844 VSTM2BA6NLU5 285 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms