RNA–Protein interactions for RNA: ENST00000559551.5

RABGGTA-209, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-209ENST00000559551 ITGB1BP2Q9UKP3 347 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 TRIM64A6NGJ6 449 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 ARGFXA6NJG6 315 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 TLX3O43711 291 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 EFNA2O43921 213 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 PTP4A3O75365 173 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 ITGA3P26006 1051 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 IFNGR2P38484 337 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 DLX5P56178 289 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 CDK5Q00535 292 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 CDK5R2Q13319 367 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 SMN1Q16637 294 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 ZNF829Q3KNS6 432 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 C1QL3Q5VWW1 255 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 C12orf73Q69YU5 71 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 TTC33Q6PID6 262 aaPredicted RBP12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 ZNF786Q8N393 782 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 OR4Q3Q8NH05 313 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 POC1BQ8TC44 478 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 C12orf43Q96C57 262 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 NXPE2Q96DL1 559 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 SECISBP2Q96T21 854 aaKnown RBP12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 SCNM1Q9BWG6 230 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 PALMDQ9NP74 551 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 DEPPQ9NTK1 212 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 IL20Q9NYY1 176 aa12.97□□□□□ -0.33
RABGGTA-209ENST00000559551 TMEM72A0PK05 275 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 ELOA3DA6NLF2 546 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 H3BN98 237 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 ETV2O00321 342 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 CCNA2P20248 432 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 GSTM3P21266 225 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 HLCSP50747 726 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 IL5RAQ01344 420 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 SNTA1Q13424 505 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 ELOA3BQ3SY89 546 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 SLC22A10Q63ZE4 541 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 POMZP3Q6PJE2 187 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 THSD4Q6ZMP0 1018 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 CYP4Z2PQ8N1L4 340 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 ELOA3Q8NG57 546 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 FGF11Q92914 225 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 KTI12Q96EK9 354 aaPredicted RBP12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 RHNO1Q9BSD3 238 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 TMEM43Q9BTV4 400 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 LHPPQ9H008 270 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 C12orf10Q9HB07 376 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 RASSF1Q9NS23 344 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 MED17Q9NVC6 651 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 STMN3Q9NZ72 180 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 SELENONQ9NZV5 590 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 VDAC3Q9Y277 283 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 SIGLEC7Q9Y286 467 aa12.96□□□□□ -0.33
RABGGTA-209ENST00000559551 MGAQ8IWI9 3026 aa12.96□□□□□ -0.34
RABGGTA-209ENST00000559551 TNRC6AQ8NDV7 1962 aaKnown RBP12.96□□□□□ -0.34
RABGGTA-209ENST00000559551 TRAV27A0A087WT01 109 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 UNC119BA6NIH7 251 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 GP1BBP13224 206 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 IL11P20809 199 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 CD96P40200 585 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 GIPRP48546 466 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 CDH15P55291 814 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 SUMO3P55854 103 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 GINS1Q14691 196 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 C6orf141Q5SZD1 244 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 SLC30A6Q6NXT4 461 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 RTL4Q6ZR62 310 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 DND1Q8IYX4 353 aaKnown RBP12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 RHOXF1Q8NHV9 184 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 SLC39A7Q92504 469 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 DNAJA3Q96EY1 480 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 FER1L6-AS2Q96M78 137 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 MOGAT1Q96PD6 335 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 SIGLEC12Q96PQ1 595 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 DOK1Q99704 481 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 KIAA1549Q9HCM3 1950 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 TMED7-TICAM2A0A0A6YYA0 188 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 NPIPB7O75200 414 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 NEURL1O76050 574 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 PNMTP11086 282 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 FMO3P31513 532 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 DNASE1L1P49184 302 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 EFNB1P98172 346 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 FOXF1Q12946 379 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 PLPPR5Q32ZL2 321 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 GXYLT1Q4G148 440 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 GRINAQ7Z429 371 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 GALNT16Q8N428 558 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 RELTQ969Z4 430 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 SGCZQ96LD1 299 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 SAMD8Q96LT4 415 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 TNFRSF13CQ96RJ3 184 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 CCNL2Q96S94 520 aaPredicted RBP12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 PTDSS2Q9BVG9 487 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 OR52D1Q9H346 318 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 SLC25A19Q9HC21 320 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 MCCC2Q9HCC0 563 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 PLA2G3Q9NZ20 509 aa12.95□□□□□ -0.34
RABGGTA-209ENST00000559551 TMED7Q9Y3B3 224 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms