RNA–Protein interactions for RNA: ENST00000559463.5

RPL28-208, Transcript of ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL28, Length 852 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-208ENST00000559463 ZNF716A6NP11 495 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 ZNF724A8MTY0 619 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 FRS3O43559 492 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 DNPH1O43598 174 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 RAMP1O60894 148 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 UQCRBP14927 111 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 GPX2P18283 190 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 PSMB1P20618 241 aaKnown RBP13.13□□□□□ -0.31
RPL28-208ENST00000559463 FKBP2P26885 142 aaKnown RBP13.13□□□□□ -0.31
RPL28-208ENST00000559463 OR3A2P47893 321 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 ART1P52961 327 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 CDK6Q00534 326 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 TSC22D1Q15714 1073 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 ADRM1Q16186 407 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 ZNF311Q5JNZ3 666 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 SPNS3Q6ZMD2 512 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.13□□□□□ -0.31
RPL28-208ENST00000559463 DHDDSQ86SQ9 333 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 COMTD1Q86VU5 262 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 CADM2Q8N3J6 435 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 DPP10Q8N608 796 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 PIK3IP1Q96FE7 263 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 HS3ST6Q96QI5 342 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 ACTR6Q9GZN1 396 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 FGFR1OP2Q9NVK5 253 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 TMEM181Q9P2C4 612 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 PRSS50Q9UI38 385 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 LEF1Q9UJU2 399 aaPredicted RBP13.13□□□□□ -0.31
RPL28-208ENST00000559463 ZNF232Q9UNY5 417 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 CORO2BQ9UQ03 480 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 TRAPPC4Q9Y296 219 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 IFT52Q9Y366 437 aa13.13□□□□□ -0.31
RPL28-208ENST00000559463 MTORP42345 2549 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 C5orf58C9J3I9 102 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 ATE1O95260 518 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 ETS2P15036 469 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 PPP3CBP16298 524 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 OR2B6P58173 313 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 H3F3AP84243 136 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 HOXC5Q00444 222 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 BNIP2Q12982 314 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 SELPLGQ14242 412 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 ZSWIM7Q19AV6 140 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 RUNDC3AQ59EK9 446 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 WBP2NLQ6ICG8 309 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 REEP3Q6NUK4 255 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 CCDC103Q8IW40 242 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 S100PBPQ96BU1 408 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 DDIT4LQ96D03 193 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 OR10A4Q9H209 315 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 TMEM38AQ9H6F2 299 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 CACYBPQ9HB71 228 aaKnown RBP13.12□□□□□ -0.31
RPL28-208ENST00000559463 FANCFQ9NPI8 374 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 GPR52Q9Y2T5 361 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 NDUFAF1Q9Y375 327 aa13.12□□□□□ -0.31
RPL28-208ENST00000559463 EVPLLA8MZ36 301 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 ANGPT2O15123 496 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 KLF4O43474 513 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 ADAP00813 363 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 DNASE1P24855 282 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 PRKAR1BP31321 381 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 NTF4P34130 210 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 MAP2K6P52564 334 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 SLC16A1P53985 500 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 MTPNP58546 118 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 COPZ1P61923 177 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 SLC35A1P78382 337 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 GUCY1A3Q02108 690 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 SF3A3Q12874 501 aaKnown RBP eCLIP13.11□□□□□ -0.312e-6■■□□□ 13.6
RPL28-208ENST00000559463 SCARB2Q14108 478 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 PDK3Q15120 406 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 GLIPR1L2Q4G1C9 344 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 SFRP5Q5T4F7 317 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 METTL21CQ5VZV1 264 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 Q6ZT83 130 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 GALNT5Q7Z7M9 940 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 PTOV1Q86YD1 416 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 PIGXQ8TBF5 258 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 TSPEARQ8WU66 669 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 SLC35B4Q969S0 331 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 C3orf49Q96BT1 292 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 ZHX1-C8orf76Q96EF9 292 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 ANKRD27Q96NW4 1050 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 CGREF1Q99674 301 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 FOXC2Q99958 501 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 CXXC4Q9H2H0 198 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 ARMC7Q9H6L4 198 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 ALPK2Q86TB3 2170 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 ZFHX3Q15911 3703 aa13.11□□□□□ -0.31
RPL28-208ENST00000559463 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.1□□□□□ -0.31
RPL28-208ENST00000559463 TMEM229AB2RXF0 380 aa13.1□□□□□ -0.31
RPL28-208ENST00000559463 FBP2O00757 339 aa13.1□□□□□ -0.31
RPL28-208ENST00000559463 TPST1O60507 370 aa13.1□□□□□ -0.31
RPL28-208ENST00000559463 RAF1P04049 648 aa13.1□□□□□ -0.31
RPL28-208ENST00000559463 TROVE2P10155 538 aaKnown RBP eCLIP13.1□□□□□ -0.31
RPL28-208ENST00000559463 FPR1P21462 350 aa13.1□□□□□ -0.31
RPL28-208ENST00000559463 CXCR1P25024 350 aa13.1□□□□□ -0.31
RPL28-208ENST00000559463 AQP1P29972 269 aa13.1□□□□□ -0.31
RPL28-208ENST00000559463 DHRS4L2Q6PKH6 230 aa13.1□□□□□ -0.31
RPL28-208ENST00000559463 ATG4DQ86TL0 474 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms