RNA–Protein interactions for RNA: ENST00000558700.5

TRAF3-205, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-205ENST00000558700 TAB1Q15750 504 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 FAM174BQ3ZCQ3 159 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 SYT14P1Q58G82 188 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 SPANXN4Q5MJ08 99 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 SFRP5Q5T4F7 317 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 ABLIM2Q6H8Q1 611 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 OGFOD2Q6N063 350 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 TNFAIP8L2Q6P589 184 aaPredicted RBP7.15□□□□□ -1.26
TRAF3-205ENST00000558700 BHLHA15Q7RTS1 189 aaPredicted RBP7.15□□□□□ -1.26
TRAF3-205ENST00000558700 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.15□□□□□ -1.26
TRAF3-205ENST00000558700 MTDHQ86UE4 582 aaKnown RBP7.15□□□□□ -1.26
TRAF3-205ENST00000558700 ZBTB46Q86UZ6 589 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 ANKRD46Q86W74 232 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 ZNF619Q8N2I2 560 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 TRIML2Q8N7C3 387 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 ZNF563Q8TA94 476 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 PIGXQ8TBF5 258 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 IGFBPL1Q8WX77 278 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 HSD17B8Q92506 261 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 AKAP1Q92667 903 aaKnown RBP eCLIP7.15□□□□□ -1.26
TRAF3-205ENST00000558700 FBXW5Q969U6 566 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 ROPN1LQ96C74 230 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 NEURL3Q96EH8 262 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 SORT1Q99523 831 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 SMR3AQ99954 134 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 SLC35A5Q9BS91 424 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 NUF2Q9BZD4 464 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 QRSL1Q9H0R6 528 aaKnown RBP7.15□□□□□ -1.26
TRAF3-205ENST00000558700 CENPHQ9H3R5 247 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 MEAF6Q9HAF1 191 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 EXOSC3Q9NQT5 275 aaKnown RBP7.15□□□□□ -1.26
TRAF3-205ENST00000558700 ACER3Q9NUN7 267 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 MARCOQ9UEW3 520 aaPredicted RBP7.15□□□□□ -1.26
TRAF3-205ENST00000558700 CHRNA9Q9UGM1 479 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.15□□□□□ -1.26
TRAF3-205ENST00000558700 SPEF1Q9Y4P9 236 aa7.15□□□□□ -1.26
TRAF3-205ENST00000558700 V9GYY5 206 aaPredicted RBP7.15□□□□□ -1.26
TRAF3-205ENST00000558700 ABCA2Q9BZC7 2435 aa7.15□□□□□ -1.27
TRAF3-205ENST00000558700 SULT2B1O00204 365 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 FCMRO60667 390 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 CNOT4O95628 575 aaKnown RBP7.14□□□□□ -1.27
TRAF3-205ENST00000558700 ADAP00813 363 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 SCG5P05408 212 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 CD3EP07766 207 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 TFPIP10646 304 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 UQCRBP14927 111 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 PAX1P15863 534 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 S100A3P33764 101 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 PGM1P36871 562 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 DIO1P49895 249 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 ATP5J2P56134 94 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 GUCY1A3Q02108 690 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 STX3Q13277 289 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 CASP8Q14790 479 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 TSC22D1Q15714 1073 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 STK11Q15831 433 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 ETFDHQ16134 617 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 GPAT3Q53EU6 434 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 CEP85LQ5SZL2 805 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 NCMAPQ5T1S8 102 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 TYW3Q6IPR3 259 aaKnown RBP7.14□□□□□ -1.27
TRAF3-205ENST00000558700 ADAM5Q6NVV9 412 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 FRRS1Q6ZNA5 592 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 TMPPEQ6ZT21 453 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 Q71RC1 249 aaPredicted RBP7.14□□□□□ -1.27
TRAF3-205ENST00000558700 GRINAQ7Z429 371 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 GALNT5Q7Z7M9 940 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 CMIPQ8IY22 773 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF100Q8IYN0 542 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 CLEC4FQ8N1N0 589 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 ARFGAP2Q8N6H7 521 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 XAGE5Q8WWM1 108 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 RAB8BQ92930 207 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 CCDC115Q96NT0 180 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 KCNK9Q9NPC2 374 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.14□□□□□ -1.27
TRAF3-205ENST00000558700 ZNF701Q9NV72 531 aaPredicted RBP7.14□□□□□ -1.27
TRAF3-205ENST00000558700 AIG1Q9NVV5 245 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 GFOD1Q9NXC2 390 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 ZIM2Q9NZV7 527 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 BTNL2Q9UIR0 455 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 KCNE5Q9UJ90 142 aa7.14□□□□□ -1.27
TRAF3-205ENST00000558700 NIPBLQ6KC79 2804 aaeCLIP7.14□□□□□ -1.27
TRAF3-205ENST00000558700 FREM1Q5H8C1 2179 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 IGKV3D-15A0A087WSY6 115 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 A0A1W2PP18 115 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 TRIM64A6NGJ6 449 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 TRIM64BA6NI03 449 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 TRPC5OSA6NMA1 111 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 GPR171O14626 319 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 SCN2BO60939 215 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 LYZL6O75951 148 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 PMS2P2O95744 297 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 LY6G6DO95868 133 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 SCGB1D2O95969 90 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 PLAUP00749 431 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 GGT1P19440 569 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 COX5AP20674 150 aa7.13□□□□□ -1.27
TRAF3-205ENST00000558700 FKBP2P26885 142 aaKnown RBP7.13□□□□□ -1.27
TRAF3-205ENST00000558700 RYKP34925 604 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms