RNA–Protein interactions for RNA: ENST00000558324.1

HERC1-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 828 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-202ENST00000558324 IDH3AP50213 366 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 ADAM5Q6NVV9 412 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 CASP12Q6UXS9 341 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 LRRC75A-AS1Q8N1F1 130 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 TMEM171Q8WVE6 324 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 HSD17B8Q92506 261 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 GTF2H4Q92759 462 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 NEUROG1Q92886 237 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 MAL2Q969L2 176 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 APH1AQ96BI3 265 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 C18orf12Q96KH6 178 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 PAIP1Q9H074 479 aaKnown RBP10.54□□□□□ -0.72
HERC1-202ENST00000558324 ESRP2Q9H6T0 727 aaKnown RBP10.54□□□□□ -0.72
HERC1-202ENST00000558324 CACYBPQ9HB71 228 aaKnown RBP10.54□□□□□ -0.72
HERC1-202ENST00000558324 NGBQ9NPG2 151 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 LAMP3Q9UQV4 416 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 PCDHB14Q9Y5E9 798 aa10.54□□□□□ -0.72
HERC1-202ENST00000558324 RAI1Q7Z5J4 1906 aaPredicted RBP10.53□□□□□ -0.72
HERC1-202ENST00000558324 CIB4A0PJX0 185 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 TRIM64A6NGJ6 449 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 TRIM64BA6NI03 449 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 H7C1Q1 480 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 CLIC1O00299 241 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 FAAHO00519 579 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 FRS3O43559 492 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 INHBBP09529 407 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 GGT1P19440 569 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 NCF2P19878 526 aaPredicted RBP10.53□□□□□ -0.72
HERC1-202ENST00000558324 COX5AP20674 150 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 CXCR1P25024 350 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 FKBP2P26885 142 aaKnown RBP10.53□□□□□ -0.72
HERC1-202ENST00000558324 NTF4P34130 210 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 MAGEA8P43361 318 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 CLK1P49759 484 aaKnown RBP10.53□□□□□ -0.72
HERC1-202ENST00000558324 AQP5P55064 265 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 COPZ1P61923 177 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 SLC35A1P78382 337 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 BSPH1Q075Z2 132 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 BNIP2Q12982 314 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 LARS2Q15031 903 aaKnown RBP10.53□□□□□ -0.72
HERC1-202ENST00000558324 PDK3Q15120 406 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 PPA1Q15181 289 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 NCMAPQ5T1S8 102 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 C9orf135Q5VTT2 229 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 FBXW9Q5XUX1 488 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 SEZ6L2Q6UXD5 910 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 ZNF440Q8IYI8 595 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 CIARTQ8N365 385 aaPredicted RBP10.53□□□□□ -0.72
HERC1-202ENST00000558324 CLIP4Q8N3C7 705 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 GOLGA6L1Q8N7Z2 621 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 ZNF611Q8N823 705 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 KBTBD8Q8NFY9 601 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 THOC1Q96FV9 657 aaKnown RBP10.53□□□□□ -0.72
HERC1-202ENST00000558324 CCDC167Q9P0B6 97 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 VPS13CQ709C8 3753 aa10.53□□□□□ -0.72
HERC1-202ENST00000558324 C2CD3Q4AC94 2353 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 A0A0G2JPF8 293 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 A0A1W2PR80 420 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 CCT8L1PA6NM43 557 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 HNRNPCL2B2RXH8 293 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 HNRNPCL3B7ZW38 293 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 C5orf58C9J3I9 102 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 GPR171O14626 319 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 SMAD7O15105 426 aaKnown RBP10.52□□□□□ -0.73
HERC1-202ENST00000558324 ZNF208O43345 1280 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 DNPH1O43598 174 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 HNRNPCL1O60812 293 aaKnown RBP10.52□□□□□ -0.73
HERC1-202ENST00000558324 MRPL33O75394 65 aaKnown RBP10.52□□□□□ -0.73
HERC1-202ENST00000558324 AKR7A3O95154 331 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 THBS1P07996 1170 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 HNRNPCL4P0DMR1 293 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 IDUAP35475 653 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 ACAA2P42765 397 aaKnown RBP10.52□□□□□ -0.73
HERC1-202ENST00000558324 HOXC5Q00444 222 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 FAPQ12884 760 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 CEACAM7Q14002 265 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 RGNQ15493 299 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 OR7A5Q15622 319 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 OTUD3Q5T2D3 398 aaPredicted RBP10.52□□□□□ -0.73
HERC1-202ENST00000558324 RNF220Q5VTB9 566 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 SERPINA11Q86U17 422 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 BIVMQ86UB2 503 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 FUNDC1Q8IVP5 155 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 ZNF433Q8N7K0 673 aaPredicted RBP10.52□□□□□ -0.73
HERC1-202ENST00000558324 OR52N5Q8NH56 324 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 LILRB1Q8NHL6 650 aaPredicted RBP10.52□□□□□ -0.73
HERC1-202ENST00000558324 PMM1Q92871 262 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 FBXW5Q969U6 566 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 MUCL1Q96DR8 90 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 SPDL1Q96EA4 605 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 NAA11Q9BSU3 229 aaPredicted RBP10.52□□□□□ -0.73
HERC1-202ENST00000558324 GSX2Q9BZM3 304 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 CXorf56Q9H5V9 222 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 ASB6Q9NWX5 421 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 ADPRHL2Q9NX46 363 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 THUMPD1Q9NXG2 353 aaKnown RBP10.52□□□□□ -0.73
HERC1-202ENST00000558324 SLC25A37Q9NYZ2 338 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 NPAP1Q9NZP6 1156 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 SLAMF8Q9P0V8 285 aa10.52□□□□□ -0.73
HERC1-202ENST00000558324 ZNF232Q9UNY5 417 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms