RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 EIF1BO60739 113 aaKnown RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 TBX19O60806 448 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 DNAJA2O60884 412 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 SEC22BO75396 215 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 CRCPO75575 148 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 CYP7B1O75881 506 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 KRT33AO76009 404 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 H6PDO95479 791 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 PNPP00491 289 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 HMGN2P05204 90 aaKnown RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 MSMBP08118 114 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 INHBAP08476 426 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 KRT16P08779 473 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 ADRA2AP08913 450 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 HKR1P10072 659 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 UBL4AP11441 157 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 CDH2P19022 906 aaPredicted RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 NTF4P34130 210 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 MAGEA12P43365 314 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 GPR6P46095 362 aaPredicted RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 HTR6P50406 440 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 SERPINB9P50453 376 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 SLC35A1P78382 337 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 MRPS25P82663 173 aaKnown RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 MYBPC1Q00872 1141 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 IL1RL1Q01638 556 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 NAAAQ02083 359 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 POU4F2Q12837 409 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 TP53BP2Q13625 1128 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 ADRM1Q16186 407 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 C3orf36Q3SXR2 165 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 SLC9B1Q4ZJI4 515 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 SYT14P1Q58G82 188 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 EXOSC6Q5RKV6 272 aaKnown RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 TSPO2Q5TGU0 170 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 REP15Q6BDI9 236 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 ABLIM2Q6H8Q1 611 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 CDC73Q6P1J9 531 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 CASP12Q6UXS9 341 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 RBMS3Q6XE24 437 aaKnown RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 LINC00114Q6XXX2 140 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 SPATA21Q7Z572 469 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 EGFL6Q8IUX8 553 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 SLC22A9Q8IVM8 553 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 CCDC103Q8IW40 242 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 ZCCHC24Q8N2G6 241 aaKnown RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 BPIFB2Q8N4F0 458 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 FAM169BQ8N8A8 192 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 POMGNT2Q8NAT1 580 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 NUP37Q8NFH4 326 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 IL17RDQ8NFM7 739 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 ZNF563Q8TA94 476 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 NANPQ8TBE9 248 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 PMM1Q92871 262 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 CDS1Q92903 461 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 CIDECQ96AQ7 238 aaPredicted RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 PPCDCQ96CD2 204 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 ZNF764Q96H86 408 aaPredicted RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 BOD1Q96IK1 185 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 QRSL1Q9H0R6 528 aaKnown RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 MS4A5Q9H3V2 200 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 REEP4Q9H6H4 257 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 ZNF442Q9H7R0 627 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 LPAR2Q9HBW0 351 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 MID1IP1Q9NPA3 183 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 SLC7A10Q9NS82 523 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 ACSS1Q9NUB1 689 aaPredicted RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 ZCCHC3Q9NUD5 404 aaKnown RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 MED29Q9NX70 200 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 GRHL1Q9NZI5 618 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 ARMCX1Q9P291 453 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 TMEM181Q9P2C4 612 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 FAF1Q9UNN5 650 aaPredicted RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 SLC9A8Q9Y2E8 581 aa4.49□□□□□ -1.69
SPG11-208ENST00000558155 UTP11Q9Y3A2 253 aaKnown RBP4.49□□□□□ -1.69
SPG11-208ENST00000558155 LOC105371242A0A075B767 164 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 TMEM129A0AVI4 362 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 OR6C65A6NJZ3 312 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 DUXAA6NLW8 204 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 NPIPB9F8W1W9 429 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 LYNX1G3V0Z9 82 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 H3BQF6 201 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 PIP5K1BO14986 540 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 AKAP10O43572 662 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 RSL1D1O76021 490 aaKnown RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 CSTAP01040 98 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 GSTA1P08263 222 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 SBK3P0C264 359 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 LYNX1P0DP58 116 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 GAAP10253 952 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 SAGP10523 405 aaPredicted RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 ACHEP22303 614 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 ATP5F1P24539 256 aaPredicted RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 COL8A2P25067 703 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 THBS4P35443 961 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 FRKP42685 505 aaPredicted RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 CCT3P49368 545 aaKnown RBP4.48□□□□□ -1.69
SPG11-208ENST00000558155 EVX1P49640 407 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 PRKAA2P54646 552 aa4.48□□□□□ -1.69
SPG11-208ENST00000558155 NAA20P61599 178 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms