RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 PSMG3-AS1Q96PY0 264 aa12.84□□□□□ -0.35
USP3-205ENST00000557884 PAQR5Q9NXK6 330 aaPredicted RBP12.84□□□□□ -0.35
USP3-205ENST00000557884 SELENONQ9NZV5 590 aa12.84□□□□□ -0.35
USP3-205ENST00000557884 CD300AQ9UGN4 299 aa12.84□□□□□ -0.35
USP3-205ENST00000557884 NKX2-6A6NCS4 301 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 ELOA3DA6NLF2 546 aaPredicted RBP12.83□□□□□ -0.36
USP3-205ENST00000557884 SULT2B1O00204 365 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 ZNF208O43345 1280 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 GMNNO75496 209 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 CLDN14O95500 239 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 IMPDH2P12268 514 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 HSD17B1P14061 328 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 AGAP20933 346 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 ENPP1P22413 925 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 CTSSP25774 331 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 CDH12P55289 794 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 CEACAM7Q14002 265 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 ELOA3BQ3SY89 546 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 ENTPD8Q5MY95 495 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 GLYATQ6IB77 296 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 DEF8Q6ZN54 512 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 TSPYL5Q86VY4 417 aaPredicted RBP12.83□□□□□ -0.36
USP3-205ENST00000557884 P3H2Q8IVL5 708 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 LSMEM1Q8N8F7 131 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 CNEP1R1Q8N9A8 125 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 ELOA3Q8NG57 546 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 LILRB4Q8NHJ6 448 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 DNAJA4Q8WW22 397 aaPredicted RBP12.83□□□□□ -0.36
USP3-205ENST00000557884 LZICQ8WZA0 190 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 CPNE4Q96A23 557 aaPredicted RBP12.83□□□□□ -0.36
USP3-205ENST00000557884 PCDHAC1Q9H158 963 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 EVA1AQ9H8M9 152 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 RNF122Q9H9V4 155 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 ADPRHL2Q9NX46 363 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 HDGFL3Q9Y3E1 203 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 HEATR5AQ86XA9 2040 aa12.83□□□□□ -0.36
USP3-205ENST00000557884 KIAA1549Q9HCM3 1950 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 A0A0B4J2E0 115 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 A0A1B0GX12 115 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 A0A1W2PNV4 684 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 A8MVM7 634 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 DVL2O14641 736 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 FMO6PO60774 539 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 PDE5AO76074 875 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 PLGP00747 810 aaPredicted RBP12.82□□□□□ -0.36
USP3-205ENST00000557884 FCGR2AP12318 317 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 CLK1P49759 484 aaKnown RBP12.82□□□□□ -0.36
USP3-205ENST00000557884 RAC3P60763 192 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 SELENOWP63302 87 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 CSNK2A1P68400 391 aaPredicted RBP12.82□□□□□ -0.36
USP3-205ENST00000557884 FOXD4Q12950 439 aaPredicted RBP12.82□□□□□ -0.36
USP3-205ENST00000557884 OR2A2Q6IF42 318 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 ULK3Q6PHR2 472 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 CBLL1Q75N03 491 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 FCRLAQ7L513 359 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 MCEMP1Q8IX19 187 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 RELL2Q8NC24 303 aaPredicted RBP12.82□□□□□ -0.36
USP3-205ENST00000557884 ABHD3Q8WU67 409 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 SLC47A1Q96FL8 570 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 HSH2DQ96JZ2 352 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 ZFP3Q96NJ6 502 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 KCNJ16Q9NPI9 418 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 TAS2R1Q9NYW7 299 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 PRDM4Q9UKN5 801 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 V9GYQ6 96 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 ADGRG4Q8IZF6 3080 aa12.82□□□□□ -0.36
USP3-205ENST00000557884 PTPN13Q12923 2485 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 IGKV1D-42A0A075B6H8 117 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 EEF1E1-BLOC1S5C9J1V9 151 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 PRSS44E7EML9 344 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 ARPC2O15144 300 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 SMAD9O15198 467 aaKnown RBP12.81□□□□□ -0.36
USP3-205ENST00000557884 EEF1E1O43324 174 aaKnown RBP12.81□□□□□ -0.36
USP3-205ENST00000557884 PMS2P2O95744 297 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 THY1P04216 161 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 PNMTP11086 282 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 FKBP2P26885 142 aaKnown RBP12.81□□□□□ -0.36
USP3-205ENST00000557884 GRNP28799 593 aaKnown RBP12.81□□□□□ -0.36
USP3-205ENST00000557884 OPRM1P35372 400 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 IDUAP35475 653 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 MAP2K6P52564 334 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 OR7A5Q15622 319 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 C1orf140Q5VVS0 124 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 VWA1Q6PCB0 445 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 ZNF613Q6PF04 617 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 C6orf89Q6UWU4 347 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 FKBP9P1Q75LS8 142 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 MAMDC2Q7Z304 686 aaPredicted RBP12.81□□□□□ -0.36
USP3-205ENST00000557884 ADAMTS16Q8TE57 1224 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 RNF128Q8TEB7 428 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 CLPTM1LQ96KA5 538 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 SFXN3Q9BWM7 321 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 POTEKPQ9BYX7 375 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 C12orf10Q9HB07 376 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 ASH1LQ9NR48 2969 aaKnown RBP12.81□□□□□ -0.36
USP3-205ENST00000557884 ZNF629Q9UEG4 869 aaPredicted RBP12.81□□□□□ -0.36
USP3-205ENST00000557884 MAGEL2Q9UJ55 1249 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 SNX13Q9Y5W8 968 aa12.81□□□□□ -0.36
USP3-205ENST00000557884 PCNX1Q96RV3 2341 aa12.8□□□□□ -0.36
USP3-205ENST00000557884 NBPF19A0A087WUL8 3843 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms