RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 AMBRA1Q9C0C7 1298 aa14□□□□□ -0.17
SCFD1-224ENST00000557713 ROPN1Q9HAT0 212 aaPredicted RBP14□□□□□ -0.17
SCFD1-224ENST00000557713 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14□□□□□ -0.17
SCFD1-224ENST00000557713 TMEM181Q9P2C4 612 aa14□□□□□ -0.17
SCFD1-224ENST00000557713 POU2F3Q9UKI9 436 aa14□□□□□ -0.17
SCFD1-224ENST00000557713 CLDN24A6NM45 220 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 M0R1B8 84 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 CPSF4O95639 269 aaKnown RBP13.99□□□□□ -0.17
SCFD1-224ENST00000557713 C1QCP02747 245 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 FAM157CP0CG43 387 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 SLC25A16P16260 332 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 MAGEA8P43361 318 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 HTR3AP46098 478 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 IDH2P48735 452 aaKnown RBP13.99□□□□□ -0.17
SCFD1-224ENST00000557713 OR2B6P58173 313 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 VLDLRP98155 873 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 CASP8Q14790 479 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 ANXA8L1Q5VT79 327 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 HMGN2P46Q86SG4 172 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 ANKRD46Q86W74 232 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 ARFGAP2Q8N6H7 521 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 ZNF525Q8N782 197 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 TMEM158Q8WZ71 300 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 CNOT9Q92600 299 aaKnown RBP13.99□□□□□ -0.17
SCFD1-224ENST00000557713 NEURL3Q96EH8 262 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 DPY30Q9C005 99 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 TMEM160Q9NX00 188 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 DCTN4Q9UJW0 460 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 FLVCR1Q9Y5Y0 555 aa13.99□□□□□ -0.17
SCFD1-224ENST00000557713 TMED7-TICAM2A0A0A6YYA0 188 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 AP3D1O14617 1153 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 IMPDH2P12268 514 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 CCNA2P20248 432 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 PDCD2Q16342 344 aaPredicted RBP13.98□□□□□ -0.17
SCFD1-224ENST00000557713 LSRQ86X29 649 aaPredicted RBP13.98□□□□□ -0.17
SCFD1-224ENST00000557713 NUDCD3Q8IVD9 361 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 ZNF781Q8N8C0 355 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 VPS37AQ8NEZ2 397 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 C10orf105Q8TEF2 133 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 NANOS1Q8WY41 292 aaKnown RBP13.98□□□□□ -0.17
SCFD1-224ENST00000557713 TESCQ96BS2 214 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 PPP1R36Q96LQ0 422 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 SLC17A5Q9NRA2 495 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 SLC7A10Q9NS82 523 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 PARPBPQ9NWS1 579 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 CDC42EP3Q9UKI2 254 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 TMED7Q9Y3B3 224 aa13.98□□□□□ -0.17
SCFD1-224ENST00000557713 TMEM72A0PK05 275 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 HMGN4O00479 90 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 PHF1O43189 567 aaPredicted RBP13.97□□□□□ -0.17
SCFD1-224ENST00000557713 ZNF208O43345 1280 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 EIF1BO60739 113 aaKnown RBP13.97□□□□□ -0.17
SCFD1-224ENST00000557713 APOBEC3AP31941 199 aaPredicted RBP13.97□□□□□ -0.17
SCFD1-224ENST00000557713 KHKP50053 298 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 EFNA4P52798 201 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 SLC35A1P78382 337 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 SLC25A3Q00325 362 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 IFFO1Q0D2I5 559 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 SLC17A1Q14916 467 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 GPAT3Q53EU6 434 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 C1QTNF12Q5T7M4 302 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 TSPO2Q5TGU0 170 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 C9orf135Q5VTT2 229 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 C17orf78Q8N4C9 275 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 C1orf162Q8NEQ5 155 aaPredicted RBP13.97□□□□□ -0.17
SCFD1-224ENST00000557713 FAM168AQ92567 244 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 PROX1Q92786 737 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 PMM1Q92871 262 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 DDIT4LQ96D03 193 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 KCNK17Q96T54 332 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 NAA11Q9BSU3 229 aaPredicted RBP13.97□□□□□ -0.17
SCFD1-224ENST00000557713 C20orf27Q9GZN8 174 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 MANSC1Q9H8J5 431 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 MARCOQ9UEW3 520 aaPredicted RBP13.97□□□□□ -0.17
SCFD1-224ENST00000557713 OSGIN1Q9UJX0 560 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 SLC9A8Q9Y2E8 581 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 AMDHD2Q9Y303 409 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 ATP23Q9Y6H3 246 aa13.97□□□□□ -0.17
SCFD1-224ENST00000557713 AGAP5A6NIR3 686 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 F12P00748 615 aaPredicted RBP13.96□□□□□ -0.17
SCFD1-224ENST00000557713 MYZAPP0CAP1 466 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 CHI3L1P36222 383 aaPredicted RBP13.96□□□□□ -0.17
SCFD1-224ENST00000557713 POLR2HP52434 150 aaKnown RBP13.96□□□□□ -0.17
SCFD1-224ENST00000557713 MAP2K6P52564 334 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 CHRNB3Q05901 458 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 SYPL1Q16563 259 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 SPANXN4Q5MJ08 99 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 CYB5R2Q6BCY4 276 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 CASP12Q6UXS9 341 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 CMIPQ8IY22 773 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 ANKFN1Q8N957 763 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 BOD1Q96IK1 185 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 PKNOX2Q96KN3 472 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 TRNT1Q96Q11 434 aaKnown RBP13.96□□□□□ -0.17
SCFD1-224ENST00000557713 SLC35A5Q9BS91 424 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 SLC38A1Q9H2H9 487 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 FKRPQ9H9S5 495 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 UPB1Q9UBR1 384 aa13.96□□□□□ -0.17
SCFD1-224ENST00000557713 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.96□□□□□ -0.17
SCFD1-224ENST00000557713 RAP2CQ9Y3L5 183 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms