RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 TUBA1CQ9BQE3 449 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 COQ10BQ9H8M1 238 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 C12orf10Q9HB07 376 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 H0Y3Z8 333 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 ADAMDEC1O15204 470 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 ZNF208O43345 1280 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 ITGA2P17301 1181 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 EIF1AXP47813 144 aaKnown RBP13.73□□□□□ -0.21
NEDD1-213ENST00000557644 RBPJQ06330 500 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 ST3GAL3Q11203 375 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 MYBPHQ13203 477 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 PIWIL3Q7Z3Z3 882 aaKnown RBP13.73□□□□□ -0.21
NEDD1-213ENST00000557644 ZNF605Q86T29 641 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 CYP4Z1Q86W10 505 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 RPRMLQ8N4K4 120 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 OR10D3Q8NH80 312 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 SLC25A43Q8WUT9 341 aaPredicted RBP13.73□□□□□ -0.21
NEDD1-213ENST00000557644 KTI12Q96EK9 354 aaPredicted RBP13.73□□□□□ -0.21
NEDD1-213ENST00000557644 POLR2J2Q9GZM3 115 aaKnown RBP13.73□□□□□ -0.21
NEDD1-213ENST00000557644 POLR2J3Q9H1A7 115 aaKnown RBP13.73□□□□□ -0.21
NEDD1-213ENST00000557644 STOML1Q9UBI4 398 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 OSGIN2Q9Y236 505 aa13.73□□□□□ -0.21
NEDD1-213ENST00000557644 SPIN1Q9Y657 262 aaPredicted RBP13.73□□□□□ -0.21
NEDD1-213ENST00000557644 A8MVM7 634 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 KPNA4O00629 521 aaPredicted RBP13.72□□□□□ -0.21
NEDD1-213ENST00000557644 NPIPB7O75200 414 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 EIF2S3LQ2VIR3 472 aaKnown RBP13.72□□□□□ -0.21
NEDD1-213ENST00000557644 HBMQ6B0K9 141 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 Q6ZPB1 254 aaPredicted RBP13.72□□□□□ -0.21
NEDD1-213ENST00000557644 ESPNLQ6ZVH7 1005 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 MEIOBQ8N635 442 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 GALNT11Q8NCW6 608 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 DDIT4LQ96D03 193 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 CCM2LQ9NUG4 571 aaPredicted RBP13.72□□□□□ -0.21
NEDD1-213ENST00000557644 PRRG2O14669 202 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 CXCL13O43927 109 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 ENTPD5O75356 428 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 RRM2P31350 389 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 RPS5P46782 204 aaKnown RBP13.72□□□□□ -0.21
NEDD1-213ENST00000557644 SPIBQ01892 262 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 PM20D2Q8IYS1 436 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 PIK3C3Q8NEB9 887 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 OR2V1Q8NHB1 315 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 POP5Q969H6 163 aaKnown RBP13.72□□□□□ -0.21
NEDD1-213ENST00000557644 ZNF426Q9BUY5 554 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 SRXN1Q9BYN0 137 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 MPDZO75970 2070 aa13.72□□□□□ -0.21
NEDD1-213ENST00000557644 GJE1A6NN92 205 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 FKBP6O75344 327 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 H1F0P07305 194 aaKnown RBP13.71□□□□□ -0.21
NEDD1-213ENST00000557644 IMPDH2P12268 514 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 KLK2P20151 261 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 IFNA8P32881 189 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 DIO1P49895 249 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 UGT2B15P54855 530 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 PPP1R8Q12972 351 aaKnown RBP13.71□□□□□ -0.21
NEDD1-213ENST00000557644 C1orf140Q5VVS0 124 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 TBPL2Q6SJ96 375 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 PFN4Q8NHR9 129 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 SLC7A13Q8TCU3 470 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 PYDC1Q8WXC3 89 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 OSTF1Q92882 214 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 MPP4Q96JB8 637 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 PTDSS2Q9BVG9 487 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 MEPEQ9NQ76 525 aaPredicted RBP13.71□□□□□ -0.21
NEDD1-213ENST00000557644 ESPL1Q14674 2120 aa13.71□□□□□ -0.21
NEDD1-213ENST00000557644 TRGV8A0A0C4DH27 118 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 TRBV4-1A0A0J9YWV2 114 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 CLCA1A8K7I4 914 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 LRRN3E7EW58 273 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 THRBP10828 461 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 MAP2K6P52564 334 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 CARD18P57730 90 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 TRAM2Q15035 370 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 FGD3Q5JSP0 725 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 RTL6Q6ICC9 239 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 TTC33Q6PID6 262 aaPredicted RBP13.71□□□□□ -0.22
NEDD1-213ENST00000557644 TMPPEQ6ZT21 453 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 PAPD5Q8NDF8 572 aaKnown RBP13.71□□□□□ -0.22
NEDD1-213ENST00000557644 PRR7Q8TB68 274 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 STK35Q8TDR2 534 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 TMEM239Q8WW34 195 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 TAAR8Q969N4 342 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 DHRS1Q96LJ7 313 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 ZNF347Q96SE7 839 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 VNN3Q9NY84 501 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 FAM215AQ9Y5M1 114 aa13.71□□□□□ -0.22
NEDD1-213ENST00000557644 A0A1W2PRQ8 180 aa13.7□□□□□ -0.22
NEDD1-213ENST00000557644 SULT2B1O00204 365 aa13.7□□□□□ -0.22
NEDD1-213ENST00000557644 PIP5K1CO60331 668 aa13.7□□□□□ -0.22
NEDD1-213ENST00000557644 TIPRLO75663 272 aa13.7□□□□□ -0.22
NEDD1-213ENST00000557644 CBLP22681 906 aa13.7□□□□□ -0.22
NEDD1-213ENST00000557644 DGCR6Q14129 220 aa13.7□□□□□ -0.22
NEDD1-213ENST00000557644 SGCBQ16585 318 aa13.7□□□□□ -0.22
NEDD1-213ENST00000557644 ACSF3Q4G176 576 aaPredicted RBP13.7□□□□□ -0.22
NEDD1-213ENST00000557644 PPP4R4Q6NUP7 873 aa13.7□□□□□ -0.22
NEDD1-213ENST00000557644 RPTNQ6XPR3 784 aa13.7□□□□□ -0.22
NEDD1-213ENST00000557644 NCCRP1Q6ZVX7 275 aaPredicted RBP13.7□□□□□ -0.22
NEDD1-213ENST00000557644 MEX3DQ86XN8 651 aaKnown RBP13.7□□□□□ -0.22
NEDD1-213ENST00000557644 TRIB1Q96RU8 372 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms