RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 FASTKQ14296 549 aaKnown RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 CAPRIN1Q14444 709 aaKnown RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 MTF1Q14872 753 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 KARSQ15046 597 aaKnown RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 ZNF146Q15072 292 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 SLC15A2Q16348 729 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 PPP1R3AQ16821 1122 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 KCTD21Q4G0X4 260 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 FASTKD1Q53R41 847 aaKnown RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 GFI1BQ5VTD9 330 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 SYPL2Q5VXT5 272 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 C3orf33Q6P1S2 294 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 AFTPHQ6ULP2 937 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 MFSD7Q6UXD7 560 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 PAQR9Q6ZVX9 377 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 CYS1Q717R9 158 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 STHQ8IWL8 128 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 SYT14Q8NB59 555 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 LEMD2Q8NC56 503 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 FAM71CQ8NEG0 241 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 OR4K14Q8NGD5 310 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 NDNFQ8TB73 568 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 RAB1CQ92928 201 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 RASD2Q96D21 266 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 TPD52L3Q96J77 140 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 OR5M11Q96RB7 305 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 RAB40CQ96S21 281 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 TMED9Q9BVK6 235 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 BLZF1Q9H2G9 400 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 LRRC40Q9H9A6 602 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 VAT1LQ9HCJ6 419 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 RGS18Q9NS28 235 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 DDX28Q9NUL7 540 aaKnown RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 ANKMY1Q9P2S6 941 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 EIF3KQ9UBQ5 218 aaKnown RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 CHRNA9Q9UGM1 479 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 CYTH4Q9UIA0 394 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 FBXW2Q9UKT8 454 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 PYCARDQ9ULZ3 195 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 EXOGQ9Y2C4 368 aaKnown RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 NDUFAF1Q9Y375 327 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 CPQQ9Y646 472 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 MAD1L1Q9Y6D9 718 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 MROH1Q8NDA8 1641 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 HMGXB3Q12766 1538 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 MLH3Q9UHC1 1453 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 YTHDC2Q9H6S0 1430 aaKnown RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 TRAPPC8Q9Y2L5 1435 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 RTL9Q8NET4 1388 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 TRPC5OSA6NMA1 111 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 H3BMM5 538 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 H7C423 109 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 PFDN6O15212 129 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 COCHO43405 550 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 KDELR3O43731 214 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 ANP32DO95626 131 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 SNAP29O95721 258 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 HCKP08631 526 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 IGFBP1P08833 259 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 HOXC4P09017 264 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 SNRPCP09234 159 aaKnown RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 UBTFL1P0CB47 393 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 CLUP10909 449 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 ACADSP16219 412 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 TNNI1P19237 187 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 MX1P20591 662 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 PRKACGP22612 351 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 SHMT2P34897 504 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 OPRL1P41146 370 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 NSFP46459 744 aaKnown RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 PKNOX1P55347 436 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 CDK16Q00536 496 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 CNTN2Q02246 1040 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 SIGLEC14Q08ET2 396 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 NAB1Q13506 487 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 HEPACAMQ14CZ8 416 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 GOLGA7BQ2TAP0 167 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 HNRNPA1L2Q32P51 320 aaKnown RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 MS4A18Q3C1V0 323 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 MLIPQ5VWP3 458 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 KCTD16Q68DU8 428 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 SLC25A25Q6KCM7 469 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 BHLHB9Q6PI77 547 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 TTC33Q6PID6 262 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 ATRAIDQ6UW56 229 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 TRAM1L1Q8N609 369 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 CYB561A3Q8NBI2 242 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 OR5D18Q8NGL1 313 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 AKR7LQ8NHP1 331 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 MAGEE2Q8TD90 523 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 DTD1Q8TEA8 209 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 CCDC12Q8WUD4 166 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 CPNE4Q96A23 557 aaPredicted RBP1.4□□□□□ -2.19
HIF1A-212ENST00000557538 ERGIC2Q96RQ1 377 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 PLIN2Q99541 437 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 TEAD3Q99594 435 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 SLC30A2Q9BRI3 323 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 SYT11Q9BT88 431 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 SLC19A3Q9BZV2 496 aa1.4□□□□□ -2.19
HIF1A-212ENST00000557538 ZYG11BQ9C0D3 744 aa1.4□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms