RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 AKIRIN1Q9H9L7 192 aaPredicted RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 RNPEPL1Q9HAU8 725 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 POPDC2Q9HBU9 364 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 FAM114A2Q9NRY5 505 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 FAM212BQ9NTI7 297 aaPredicted RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 FAM49BQ9NUQ9 324 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP2.66□□□□□ -1.98
VRK1-207ENST00000557352 TRPC4Q9UBN4 977 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 PACSIN2Q9UNF0 486 aaPredicted RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 UTP11Q9Y3A2 253 aaKnown RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 SPAG17Q6Q759 2223 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 MUC22E2RYF6 1773 aaPredicted RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 TRIOBPQ9H2D6 2365 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 RANBP2P49792 3224 aaKnown RBP2.66□□□□□ -1.98
VRK1-207ENST00000557352 CEP192Q8TEP8 1941 aa2.66□□□□□ -1.98
VRK1-207ENST00000557352 A0A087X0K7 114 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 ATP6AP2A0A1C7CYW4 349 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 HACD1B0YJ81 288 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 EIF3HO15372 352 aaKnown RBP eCLIP2.65□□□□□ -1.99
VRK1-207ENST00000557352 TTI1O43156 1089 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 RAD51CO43502 376 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 PRPSAP2O60256 369 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 IGLV3-27P01718 113 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 RALAP11233 206 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 LAMP1P11279 417 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 KDELR1P24390 212 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 IVDP26440 423 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 ADORA2BP29275 332 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 HOXA9P31269 272 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 COILP38432 576 aaPredicted RBP2.65□□□□□ -1.99
VRK1-207ENST00000557352 HSPA9P38646 679 aaKnown RBP2.65□□□□□ -1.99
VRK1-207ENST00000557352 MAGEA6P43360 314 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 OR1G1P47890 313 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 TUFMP49411 452 aaKnown RBP2.65□□□□□ -1.99
VRK1-207ENST00000557352 TKTL1P51854 596 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 ARHGDIAP52565 204 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 VCPP55072 806 aaKnown RBP2.65□□□□□ -1.99
VRK1-207ENST00000557352 CCL23P55773 120 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 MAP3K7CLP57077 242 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 VSNL1P62760 191 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 CDK16Q00536 496 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 DR1Q01658 176 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 C2orf54Q08AI8 447 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 PLD1Q13393 1074 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 DPYSQ14117 519 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 DPYSL3Q14195 570 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 SMC1AQ14683 1233 aaKnown RBP2.65□□□□□ -1.99
VRK1-207ENST00000557352 UNC50Q53HI1 259 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 OR6B2Q6IFH4 312 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 ZCCHC12Q6PEW1 402 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 CCDC137Q6PK04 289 aaKnown RBP2.65□□□□□ -1.99
VRK1-207ENST00000557352 MFSD7Q6UXD7 560 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 SIGLEC15Q6ZMC9 328 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 KCTD9Q7L273 389 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 CROCCP2Q86T23 111 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 COLGALT1Q8NBJ5 622 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 CCDC197Q8NCU1 140 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 ICA1LQ8NDH6 482 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 ZNF461Q8TAF7 563 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 UBA3Q8TBC4 463 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 FAM172AQ8WUF8 416 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 MAGOHBQ96A72 148 aaKnown RBP2.65□□□□□ -1.99
VRK1-207ENST00000557352 LRRC45Q96CN5 670 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 HAUS1Q96CS2 278 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 MS4A14Q96JA4 679 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 CAPZA3Q96KX2 299 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 SERPINB11Q96P15 392 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 OLFM3Q96PB7 478 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 PPP1R2P1Q96PQ5 205 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 RNF157Q96PX1 679 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 OR5M11Q96RB7 305 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 PEBP4Q96S96 227 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 ERP44Q9BS26 406 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 SNRNP25Q9BV90 132 aaKnown RBP2.65□□□□□ -1.99
VRK1-207ENST00000557352 ST6GALNAC5Q9BVH7 336 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 ULBP1Q9BZM6 244 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 DDX47Q9H0S4 455 aaKnown RBP2.65□□□□□ -1.99
VRK1-207ENST00000557352 MED4Q9NPJ6 270 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 PLEK2Q9NYT0 353 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 TAS2R16Q9NYV7 291 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 KLRF1Q9NZS2 232 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 EIF3KQ9UBQ5 218 aaKnown RBP2.65□□□□□ -1.99
VRK1-207ENST00000557352 TEKT2Q9UIF3 430 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 ERVK-19Q9WJR5 959 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 ASB3Q9Y575 518 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 OR1A2Q9Y585 309 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 TICRRQ7Z2Z1 1910 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 HEATR5BQ9P2D3 2071 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 REV3LO60673 3130 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 COL4A2P08572 1712 aa2.65□□□□□ -1.99
VRK1-207ENST00000557352 GOLGA4Q13439 2230 aaKnown RBP2.64□□□□□ -1.99
VRK1-207ENST00000557352 PINLYPA6NC86 204 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 YJEFN3A6XGL0 299 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 TMEM110-MUSTN1A8MSY1 372 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 E7ESA3 106 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 GOLGA8SH3BPF8 625 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 CACNB4O00305 520 aaPredicted RBP2.64□□□□□ -1.99
VRK1-207ENST00000557352 CLDN5O00501 218 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 SYT7O43581 403 aa2.64□□□□□ -1.99
VRK1-207ENST00000557352 HCRTO43612 131 aa2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms