RNA–Protein interactions for RNA: ENST00000557092.5

NEDD1-209, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-209ENST00000557092 MAL2Q969L2 176 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 CCL19Q99731 98 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 A4GALTQ9NPC4 353 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 NOSIPQ9Y314 301 aaKnown RBP16.32■□□□□ 0.2
NEDD1-209ENST00000557092 IFT52Q9Y366 437 aa16.32■□□□□ 0.2
NEDD1-209ENST00000557092 IGKV3D-15A0A087WSY6 115 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 LYZL6O75951 148 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 HOXB9P17482 250 aaPredicted RBP16.31■□□□□ 0.2
NEDD1-209ENST00000557092 EDNRAP25101 427 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 ATP4BP51164 291 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 SLC35A1P78382 337 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 FOXD4Q12950 439 aaPredicted RBP16.31■□□□□ 0.2
NEDD1-209ENST00000557092 CAPRIN1Q14444 709 aaKnown RBP16.31■□□□□ 0.2
NEDD1-209ENST00000557092 PDK3Q15120 406 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 ZNF311Q5JNZ3 666 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 PAGE3Q5JUK9 113 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 LRIF1Q5T3J3 769 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 WBP2NLQ6ICG8 309 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 ZNF704Q6ZNC4 412 aaPredicted RBP16.31■□□□□ 0.2
NEDD1-209ENST00000557092 C20orf204Q6ZNR8 217 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 CCDC103Q8IW40 242 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 CLIP4Q8N3C7 705 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 BBS10Q8TAM1 723 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 PIGTQ969N2 578 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 TMUB1Q9BVT8 246 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 SPATA9Q9BWV2 254 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 SLC25A37Q9NYZ2 338 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 SLAMF8Q9P0V8 285 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 TRAPPC4Q9Y296 219 aa16.31■□□□□ 0.2
NEDD1-209ENST00000557092 FREM1Q5H8C1 2179 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 ZC3H12DA2A288 527 aaKnown RBP16.3■□□□□ 0.2
NEDD1-209ENST00000557092 ZNF716A6NP11 495 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 GPR171O14626 319 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 SMPD2O60906 423 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 IMPDH2P12268 514 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 BMP2P12643 396 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 PPIBP23284 216 aaKnown RBP16.3■□□□□ 0.2
NEDD1-209ENST00000557092 ACAA2P42765 397 aaKnown RBP16.3■□□□□ 0.2
NEDD1-209ENST00000557092 MAP2K6P52564 334 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 ADAM8P78325 824 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 IRX1P78414 480 aaPredicted RBP16.3■□□□□ 0.2
NEDD1-209ENST00000557092 TAB1Q15750 504 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 STK11Q15831 433 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 GCNT6Q5T4J0 391 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 PRAMEF8Q5VWM4 474 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 PRAMEF7Q5VXH5 474 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 MSRB3Q8IXL7 192 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 UBE2J2Q8N2K1 259 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 HSD17B8Q92506 261 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 NAA11Q9BSU3 229 aaPredicted RBP16.3■□□□□ 0.2
NEDD1-209ENST00000557092 POTEKPQ9BYX7 375 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 ADAM19Q9H013 955 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 BCL2L10Q9HD36 194 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 NGBQ9NPG2 151 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 VAPAQ9P0L0 249 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.3■□□□□ 0.2
NEDD1-209ENST00000557092 DCTN4Q9UJW0 460 aa16.3■□□□□ 0.2
NEDD1-209ENST00000557092 EIF1BO60739 113 aaKnown RBP16.29■□□□□ 0.2
NEDD1-209ENST00000557092 RAMP1O60894 148 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 SASH3O75995 380 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 PLAUP00749 431 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 IGHV3-9P01782 118 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 PRG2P13727 222 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 IDUAP35475 653 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 NKX6-1P78426 367 aaPredicted RBP16.29■□□□□ 0.2
NEDD1-209ENST00000557092 SERPINA11Q86U17 422 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 WFDC11Q8NEX6 87 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 NFKBIDQ8NI38 313 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 APH1AQ96BI3 265 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 PIP5K1AQ99755 562 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 USB1Q9BQ65 265 aaKnown RBP16.29■□□□□ 0.2
NEDD1-209ENST00000557092 RABEP2Q9H5N1 569 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 NPHS2Q9NP85 383 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 TMEM45AQ9NWC5 275 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 CHST2Q9Y4C5 530 aa16.29■□□□□ 0.2
NEDD1-209ENST00000557092 A0A1W2PP18 115 aa16.28■□□□□ 0.2
NEDD1-209ENST00000557092 FRS3O43559 492 aa16.28■□□□□ 0.2
NEDD1-209ENST00000557092 MRPL33O75394 65 aaKnown RBP16.28■□□□□ 0.2
NEDD1-209ENST00000557092 PGM3O95394 542 aa16.28■□□□□ 0.2
NEDD1-209ENST00000557092 CNOT4O95628 575 aaKnown RBP16.28■□□□□ 0.2
NEDD1-209ENST00000557092 ARAFP10398 606 aa16.28■□□□□ 0.2
NEDD1-209ENST00000557092 IGHV1-2P23083 117 aa16.28■□□□□ 0.2
NEDD1-209ENST00000557092 SLC16A1P53985 500 aa16.28■□□□□ 0.2
NEDD1-209ENST00000557092 BNIP2Q12982 314 aa16.28■□□□□ 0.2
NEDD1-209ENST00000557092 FBXW9Q5XUX1 488 aa16.28■□□□□ 0.2
NEDD1-209ENST00000557092 CASP12Q6UXS9 341 aa16.28■□□□□ 0.2
NEDD1-209ENST00000557092 P3H2Q8IVL5 708 aa16.28■□□□□ 0.2
NEDD1-209ENST00000557092 SLC52A3Q9NQ40 469 aa16.28■□□□□ 0.2
NEDD1-209ENST00000557092 PRDM4Q9UKN5 801 aa16.28■□□□□ 0.2
NEDD1-209ENST00000557092 TRIM33Q9UPN9 1127 aa16.28■□□□□ 0.2
NEDD1-209ENST00000557092 CORO2BQ9UQ03 480 aa16.28■□□□□ 0.2
NEDD1-209ENST00000557092 MAP1AP78559 2803 aaPredicted RBP16.27■□□□□ 0.2
NEDD1-209ENST00000557092 EVPLLA8MZ36 301 aa16.27■□□□□ 0.2
NEDD1-209ENST00000557092 CLOCKO15516 846 aa16.27■□□□□ 0.2
NEDD1-209ENST00000557092 ARHGEF9O43307 516 aa16.27■□□□□ 0.2
NEDD1-209ENST00000557092 EDF1O60869 148 aaKnown RBP16.27■□□□□ 0.2
NEDD1-209ENST00000557092 GPIP06744 558 aa16.27■□□□□ 0.2
NEDD1-209ENST00000557092 ETS2P15036 469 aa16.27■□□□□ 0.2
NEDD1-209ENST00000557092 GGT1P19440 569 aa16.27■□□□□ 0.2
NEDD1-209ENST00000557092 COX5AP20674 150 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms