RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 ELOA3DA6NLF2 546 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-225ENST00000556798 FAM90A27PA6NNH2 459 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 ZNF208O43345 1280 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 PDE5AO76074 875 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 SYNGR4O95473 234 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 TMIGD3P0DMS9 266 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-225ENST00000556798 PTNP21246 168 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 DIO1P49895 249 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 AGFG1P52594 562 aaKnown RBP15.66■□□□□ 0.1
SHMT2-225ENST00000556798 CBX1P83916 185 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 FOXF2Q12947 444 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 FXNQ16595 210 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 ZNF239Q16600 458 aaKnown RBP15.66■□□□□ 0.1
SHMT2-225ENST00000556798 ELOA3BQ3SY89 546 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 ENTPD8Q5MY95 495 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 DEF8Q6ZN54 512 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 CBLL1Q75N03 491 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 LIX1LQ8IVB5 337 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 ELOA3Q8NG57 546 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 LZICQ8WZA0 190 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 DDIT4LQ96D03 193 aa15.66■□□□□ 0.1
SHMT2-225ENST00000556798 PAQR5Q9NXK6 330 aaPredicted RBP15.66■□□□□ 0.1
SHMT2-225ENST00000556798 HSPB2A8KAH6 182 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 SULT2B1O00204 365 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 ARPC2O15144 300 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 FMO6PO60774 539 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 GMNNO75496 209 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 RCBTB2O95199 551 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 CHRNB4P30926 498 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 CDH12P55289 794 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 HSPB2Q16082 182 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 ULK3Q6PHR2 472 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 XKRXQ6PP77 449 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 C6orf89Q6UWU4 347 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 TMPPEQ6ZT21 453 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 ADAMTS16Q8TE57 1224 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 CA5BP1Q8WTZ4 195 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 DNAJA4Q8WW22 397 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-225ENST00000556798 ASB5Q8WWX0 329 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 CPNE4Q96A23 557 aaPredicted RBP15.65■□□□□ 0.1
SHMT2-225ENST00000556798 HSH2DQ96JZ2 352 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 CLPTM1LQ96KA5 538 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 UCK2Q9BZX2 261 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 C1orf21Q9H246 121 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 RNF122Q9H9V4 155 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 TIGARQ9NQ88 270 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 SELENONQ9NZV5 590 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 MAGEL2Q9UJ55 1249 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 PRDM4Q9UKN5 801 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 CLEC4AQ9UMR7 237 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 HDGFL3Q9Y3E1 203 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 SNX13Q9Y5W8 968 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 V9GYQ6 96 aa15.65■□□□□ 0.1
SHMT2-225ENST00000556798 NKX2-6A6NCS4 301 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 A8MVM7 634 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 CLDN1O95832 211 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 THY1P04216 161 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 IMPDH2P12268 514 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 FCGR2AP12318 317 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 BMP5P22003 454 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 ENPP1P22413 925 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 OR2B6P58173 313 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 RAC3P60763 192 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 ZNF613Q6PF04 617 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 P3H2Q8IVL5 708 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 FAM86B1Q8N7N1 296 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 ABHD3Q8WU67 409 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 SLC47A1Q96FL8 570 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 THTPAQ9BU02 230 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 C12orf10Q9HB07 376 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 RPS6KA6Q9UK32 745 aa15.64■□□□□ 0.09
SHMT2-225ENST00000556798 PRPF19Q9UMS4 504 aaKnown RBP15.64■□□□□ 0.09
SHMT2-225ENST00000556798 IGKV1D-42A0A075B6H8 117 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 SMAD9O15198 467 aaKnown RBP15.63■□□□□ 0.09
SHMT2-225ENST00000556798 LYPD3O95274 346 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 CLDN14O95500 239 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 PMS2P2O95744 297 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 PNMTP11086 282 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 AGAP20933 346 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 CTSSP25774 331 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 FKBP2P26885 142 aaKnown RBP15.63■□□□□ 0.09
SHMT2-225ENST00000556798 IDUAP35475 653 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 CLK1P49759 484 aaKnown RBP15.63■□□□□ 0.09
SHMT2-225ENST00000556798 MAP2K6P52564 334 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 TAS2R41P59536 307 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 CSNK2A1P68400 391 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-225ENST00000556798 SIRPAP78324 504 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 EGR4Q05215 589 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 FOXD4Q12950 439 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-225ENST00000556798 BNIP1Q12981 228 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 SPATS1Q496A3 300 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 IFI44LQ53G44 452 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 C1orf140Q5VVS0 124 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 OR2A2Q6IF42 318 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 FKBP9P1Q75LS8 142 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 FCRLAQ7L513 359 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 ARHGAP24Q8N264 748 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 CNEP1R1Q8N9A8 125 aa15.63■□□□□ 0.09
SHMT2-225ENST00000556798 RELL2Q8NC24 303 aaPredicted RBP15.63■□□□□ 0.09
SHMT2-225ENST00000556798 RNF128Q8TEB7 428 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms