RNA–Protein interactions for RNA: ENST00000556534.1

SCFD1-221, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-221ENST00000556534 HTR1EP28566 365 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 CTRLP40313 264 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 GRIA1P42261 906 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 APOC4P55056 127 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 TIMM10P62072 90 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 MPPED2Q15777 294 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 TPGS2Q68CL5 300 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 TMEM123Q8N131 208 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 BHLHE23Q8NDY6 225 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 OR56B2PQ8NGI1 322 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 PAQR8Q8TEZ7 354 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 AENQ8WTP8 325 aaKnown RBP2.88□□□□□ -1.95
SCFD1-221ENST00000556534 SRSF12Q8WXF0 261 aaKnown RBP2.88□□□□□ -1.95
SCFD1-221ENST00000556534 MYDGFQ969H8 173 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 MYLPFQ96A32 169 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 PELI1Q96FA3 418 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 COQ2Q96H96 371 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 SH3YL1Q96HL8 342 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-221ENST00000556534 NPAS2Q99743 824 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 TMEM43Q9BTV4 400 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 SLC25A39Q9BZJ4 359 aaPredicted RBP2.88□□□□□ -1.95
SCFD1-221ENST00000556534 NXF3Q9H4D5 531 aaKnown RBP2.88□□□□□ -1.95
SCFD1-221ENST00000556534 FN3KRPQ9HA64 309 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 MMP26Q9NRE1 261 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 HYPKQ9NX55 129 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 PIPOXQ9P0Z9 390 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 GNG12Q9UBI6 72 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 SLCO1B1Q9Y6L6 691 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 ATP10AO60312 1499 aa2.88□□□□□ -1.95
SCFD1-221ENST00000556534 NSD2O96028 1365 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 THSD7BQ9C0I4 1608 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 TRAV26-1A0A087WT03 109 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 CA11O75493 328 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 SLITRK3O94933 977 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 CYP2B6P20813 491 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 LAP3P28838 519 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 GDI1P31150 447 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 CCNA1P78396 465 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 MAP2K1Q02750 393 aaPredicted RBP2.87□□□□□ -1.95
SCFD1-221ENST00000556534 CUL1Q13616 776 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 EXOC3L2Q2M3D2 409 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 KCTD21Q4G0X4 260 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 ZSCAN25Q6NSZ9 544 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 TIFABQ6ZNK6 161 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 ARCQ7LC44 396 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 EFL1Q7Z2Z2 1120 aaKnown RBP2.87□□□□□ -1.95
SCFD1-221ENST00000556534 SLC22A9Q8IVM8 553 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 SYT14Q8NB59 555 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 SUMF2Q8NBJ7 301 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 OR51G2Q8NGK0 314 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 OR5D13Q8NGL4 314 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 RDH5Q92781 318 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 FBXO32Q969P5 355 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 MS4A14Q96JA4 679 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 TCEANC2Q96MN5 208 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 TGM7Q96PF1 710 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 NPY6RQ99463 290 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 RIT2Q99578 217 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 KLHDC3Q9BQ90 382 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 NARFLQ9H6Q4 476 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 SMOXQ9NWM0 555 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 NMRK1Q9NWW6 199 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 CTNNA3Q9UI47 895 aa2.87□□□□□ -1.95
SCFD1-221ENST00000556534 RLFQ13129 1914 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 ZNF208O43345 1280 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 HCN1O60741 890 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 ECI2O75521 394 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 PGCP20142 388 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 HPCAL1P37235 193 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 TDO2P48775 406 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 SLC10A7Q0GE19 358 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 FILIP1LQ4L180 1135 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 TMEM225Q6GV28 225 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 FAM71F2Q6NXP2 309 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 VRK2Q86Y07 508 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 NRMQ8IXM6 262 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 LRRC75A-AS1Q8N1F1 130 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 OR5L2Q8NGL0 311 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 OR4D5Q8NGN0 318 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 DNAJA4Q8WW22 397 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-221ENST00000556534 IL22RA2Q969J5 263 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 C12orf66Q96MD2 445 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 MBOAT4Q96T53 435 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 NRTNQ99748 197 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 SLC6A7Q99884 636 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 SIGLEC8Q9NYZ4 499 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 C6orf203Q9P0P8 240 aaPredicted RBP2.86□□□□□ -1.95
SCFD1-221ENST00000556534 WARS2Q9UGM6 360 aaKnown RBP2.86□□□□□ -1.95
SCFD1-221ENST00000556534 UGT2A1Q9Y4X1 527 aa2.86□□□□□ -1.95
SCFD1-221ENST00000556534 LTBP1Q14766 1721 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 A0A0G2JRQ6 117 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 HELTA6NFD8 242 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 FOXE1O00358 373 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-221ENST00000556534 HCRTR1O43613 425 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 FCMRO60667 390 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 ZNF780AO75290 641 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-221ENST00000556534 LALBAP00709 142 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 CA1P00915 261 aaPredicted RBP2.85□□□□□ -1.95
SCFD1-221ENST00000556534 SERPINA3P01011 423 aa2.85□□□□□ -1.95
SCFD1-221ENST00000556534 IGKV3-11P04433 115 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms