RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 RNF220Q5VTB9 566 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 DNAJC14Q6Y2X3 702 aaPredicted RBP11.17□□□□□ -0.62
SNX6-207ENST00000556303 BHLHA15Q7RTS1 189 aaPredicted RBP11.17□□□□□ -0.62
SNX6-207ENST00000556303 WFDC8Q8IUA0 241 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 KRTAP1-3Q8IUG1 177 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 ZNF100Q8IYN0 542 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 WFDC11Q8NEX6 87 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 OR52P1PQ8NH57 321 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 LRRC8CQ8TDW0 803 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 IGFBPL1Q8WX77 278 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 STON2Q8WXE9 905 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 GTF2H4Q92759 462 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 ZBTB9Q96C00 473 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 C18orf12Q96KH6 178 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 OR52B2Q96RD2 323 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 NAA11Q9BSU3 229 aaPredicted RBP11.17□□□□□ -0.62
SNX6-207ENST00000556303 CCDC28BQ9BUN5 200 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 CXorf56Q9H5V9 222 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 PARPBPQ9NWS1 579 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 METRNQ9UJH8 293 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 OSGIN1Q9UJX0 560 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 TMED7Q9Y3B3 224 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 GMEB1Q9Y692 573 aa11.17□□□□□ -0.62
SNX6-207ENST00000556303 A0A096LPI6 279 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 ZNF716A6NP11 495 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 POLR3GO15318 223 aaPredicted RBP11.16□□□□□ -0.62
SNX6-207ENST00000556303 ADAM11O75078 769 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 CD3EP07766 207 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 BMP2P12643 396 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 COPZ1P61923 177 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 TAB1Q15750 504 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 MAPK11Q15759 364 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 NCMAPQ5T1S8 102 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 FBXW9Q5XUX1 488 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 WBP2NLQ6ICG8 309 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 PAQR6Q6TCH4 344 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 PNPT1Q8TCS8 783 aaKnown RBP11.16□□□□□ -0.62
SNX6-207ENST00000556303 SLC38A5Q8WUX1 472 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 TMEM171Q8WVE6 324 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 MUCL1Q96DR8 90 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 RADILQ96JH8 1075 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 ARL5BQ96KC2 179 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 ATP6V1G3Q96LB4 118 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 ZNF300Q96RE9 604 aaPredicted RBP11.16□□□□□ -0.62
SNX6-207ENST00000556303 BCL2L10Q9HD36 194 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 TCF7L2Q9NQB0 619 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 SLC6A13Q9NSD5 602 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 ZNF701Q9NV72 531 aaPredicted RBP11.16□□□□□ -0.62
SNX6-207ENST00000556303 NOSIPQ9Y314 301 aaKnown RBP11.16□□□□□ -0.62
SNX6-207ENST00000556303 RNF115Q9Y4L5 304 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 PCDHB14Q9Y5E9 798 aa11.16□□□□□ -0.62
SNX6-207ENST00000556303 CLIC1O00299 241 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 MRPL33O75394 65 aaKnown RBP11.15□□□□□ -0.62
SNX6-207ENST00000556303 C1QCP02747 245 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 GPIP06744 558 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 ETFAP13804 333 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 GGT1P19440 569 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 PPIBP23284 216 aaKnown RBP11.15□□□□□ -0.62
SNX6-207ENST00000556303 CXCR1P25024 350 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 TACR3P29371 465 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 OR2B6P58173 313 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 RGNQ15493 299 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 Q5PR19 223 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 C6orf10Q5SRN2 563 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 OR7E24Q6IFN5 339 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 VPS33AQ96AX1 596 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 APH1AQ96BI3 265 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 BDH2Q9BUT1 245 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 SF3B5Q9BWJ5 86 aaKnown RBP11.15□□□□□ -0.62
SNX6-207ENST00000556303 SPATA9Q9BWV2 254 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 PAIP1Q9H074 479 aaKnown RBP11.15□□□□□ -0.62
SNX6-207ENST00000556303 A4GALTQ9NPC4 353 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 SLC9A8Q9Y2E8 581 aa11.15□□□□□ -0.62
SNX6-207ENST00000556303 HIVEP2P31629 2446 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 ABCA2Q9BZC7 2435 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 TMEM72A0PK05 275 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 HMGB1P1B2RPK0 211 aaPredicted RBP11.14□□□□□ -0.63
SNX6-207ENST00000556303 AP3D1O14617 1153 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 VAMP5O95183 116 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 BCHEP06276 602 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 INHBBP09529 407 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 ETS2P15036 469 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 IGHV1-2P23083 117 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 ACAA2P42765 397 aaKnown RBP11.14□□□□□ -0.63
SNX6-207ENST00000556303 IDH3AP50213 366 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 ATP4BP51164 291 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 SLC17A1Q14916 467 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 PPA1Q15181 289 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 LRIF1Q5T3J3 769 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 BLOC1S3Q6QNY0 202 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 ZNF836Q6ZNA1 936 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 HMGN2P46Q86SG4 172 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 ZNF433Q8N7K0 673 aaPredicted RBP11.14□□□□□ -0.63
SNX6-207ENST00000556303 GOLGA6L1Q8N7Z2 621 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 OR9I1Q8NGQ6 314 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 BBS10Q8TAM1 723 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 AKAP1Q92667 903 aaKnown RBP eCLIP11.14□□□□□ -0.63
SNX6-207ENST00000556303 FBXW5Q969U6 566 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 TMEM19Q96HH6 336 aa11.14□□□□□ -0.63
SNX6-207ENST00000556303 GRIP2Q9C0E4 1043 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms