RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 NUP210Q8TEM1 1887 aaPredicted RBP7.18□□□□□ -1.26
CHD8-209ENST00000555935 BCL7CQ8WUZ0 217 aaPredicted RBP7.18□□□□□ -1.26
CHD8-209ENST00000555935 TNFAIP8L1Q8WVP5 186 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 HMGB4Q8WW32 186 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 ZG16BQ96DA0 208 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 PELI1Q96FA3 418 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 C16orf58Q96GQ5 468 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 NARS2Q96I59 477 aaKnown RBP7.18□□□□□ -1.26
CHD8-209ENST00000555935 IL17FQ96PD4 163 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.18□□□□□ -1.26
CHD8-209ENST00000555935 ZDHHC5Q9C0B5 715 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 POLMQ9NP87 494 aaPredicted RBP7.18□□□□□ -1.26
CHD8-209ENST00000555935 CTSFQ9UBX1 484 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 ZNF443Q9Y2A4 671 aaPredicted RBP7.18□□□□□ -1.26
CHD8-209ENST00000555935 DISC1C4P0D8 188 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 FMO6PO60774 539 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 CLEC3AO75596 197 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 AGR2O95994 175 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 GP1BAP07359 652 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 OR2T7P0C7T2 308 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 IL9P15248 144 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 PVALBP20472 110 aaPredicted RBP7.18□□□□□ -1.26
CHD8-209ENST00000555935 RFC3P40938 356 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 GATMP50440 423 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 STX4Q12846 297 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 CSRP2Q16527 193 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 TP53I3Q53FA7 332 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 TMEM35AQ53FP2 167 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 C9orf64Q5T6V5 341 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 HES5Q5TA89 166 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 TXNDC8Q6A555 127 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 PWWP2BQ6NUJ5 590 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 SSX6Q7RTT6 188 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 TMCO2Q7Z6W1 182 aaPredicted RBP7.18□□□□□ -1.26
CHD8-209ENST00000555935 RNF180Q86T96 592 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 RANBP3LQ86VV4 465 aaPredicted RBP7.18□□□□□ -1.26
CHD8-209ENST00000555935 CDK20Q8IZL9 346 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 SLC43A2Q8N370 569 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 POMGNT2Q8NAT1 580 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 OR52B4Q8NGK2 314 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 OR6N1Q8NGY5 312 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 OR2T27Q8NH04 317 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 OR4C6Q8NH72 309 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 SYNPRQ8TBG9 265 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 MIB2Q96AX9 1013 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 TSNAXQ99598 290 aaKnown RBP7.18□□□□□ -1.26
CHD8-209ENST00000555935 PRSS27Q9BQR3 290 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 ESRP2Q9H6T0 727 aaKnown RBP7.18□□□□□ -1.26
CHD8-209ENST00000555935 C14orf105Q9NVL8 296 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 SAGE1Q9NXZ1 904 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 HCSTQ9UBK5 93 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 ASF1AQ9Y294 204 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 V9GY05 133 aa7.18□□□□□ -1.26
CHD8-209ENST00000555935 TRBV2A0A0J9YWF9 115 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 DUXAA6NLW8 204 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 HOXA2O43364 376 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 ZNF254O75437 659 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 ERAL1O75616 437 aaKnown RBP7.17□□□□□ -1.26
CHD8-209ENST00000555935 IFNGP01579 166 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 CSF1P09603 554 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 ELFN1P0C7U0 828 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 CSNK2A2P19784 350 aaPredicted RBP7.17□□□□□ -1.26
CHD8-209ENST00000555935 MAKP20794 623 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 TAS2R20P59543 309 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 SORDQ00796 357 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 ZNF345Q14585 488 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 SLC9A5Q14940 896 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 FAAP20Q6NZ36 180 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 ZNF613Q6PF04 617 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 TMPRSS11FQ6ZWK6 438 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 GLB1L2Q8IW92 636 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 CMTM8Q8IZV2 173 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 SPAG16Q8N0X2 631 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 RELL2Q8NC24 303 aaPredicted RBP7.17□□□□□ -1.26
CHD8-209ENST00000555935 NUP43Q8NFH3 380 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 TMEM239Q8WW34 195 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 ASB12Q8WXK4 309 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 PEX11GQ96HA9 241 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 LRFN5Q96NI6 719 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 GFI1Q99684 422 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 ACTRT3Q9BYD9 372 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 PBX4Q9BYU1 374 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 ALX4Q9H161 411 aaPredicted RBP7.17□□□□□ -1.26
CHD8-209ENST00000555935 MTHFD2LQ9H903 347 aaPredicted RBP7.17□□□□□ -1.26
CHD8-209ENST00000555935 NOX4Q9NPH5 578 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 ANKRD10Q9NXR5 420 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 SPG21Q9NZD8 308 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 LRFN2Q9ULH4 789 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 NOSIPQ9Y314 301 aaKnown RBP7.17□□□□□ -1.26
CHD8-209ENST00000555935 PRKAB1Q9Y478 270 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 DOCK3Q8IZD9 2030 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 TBC1D3EA0A087X179 549 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 KANTRA0A1W2PQU2 76 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 CTNSO60931 367 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 LEFTY1O75610 366 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 RBBP9O75884 186 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 EFEMP2O95967 443 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 RLN1P04808 185 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 CDK2P24941 298 aa7.17□□□□□ -1.26
CHD8-209ENST00000555935 EDNRAP25101 427 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms